Pairwise Alignments

Query, 403 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 396 a.a., bicyclomycin/cysteine/sulfonamide efflux transporter from Escherichia coli BL21

 Score =  135 bits (339), Expect = 3e-36
 Identities = 99/361 (27%), Positives = 185/361 (51%), Gaps = 31/361 (8%)

Query: 15  LLAMMIIATGQVGVSIYLPSLPLISRDLQVDQASAQMLVTLFLLGFGGSQLFYGALSDAV 74
           LLAM++     + + +YLP+LP+IS    V   S QM ++ ++LGF   QL YG ++D+ 
Sbjct: 17  LLAMLM----PLSIDMYLPALPVISAQFGVPAGSTQMTLSTYILGFALGQLIYGPMADSF 72

Query: 75  GRRPTFLLGQGIYLLGTVLCVMMSDHFQALEFGRLLQGLGAGSASVLGRSVLRDSYDGFH 134
           GR+P  L G  ++    V C + +   Q +   R   GL A +ASV+  +++RD Y    
Sbjct: 73  GRKPVVLGGTLVFAAAAVACALANTIDQLIVM-RFFHGLAAAAASVVINALMRDIYPKEE 131

Query: 135 LTKALSYLSITASIMPIIAPVLGGWLAYHLSWQSVFIFVLLYIGAIFTLGLM--ILPETL 192
            ++ +S++ +  +I P++AP++GGW+   LSW   +IF +L + AI    ++  ++ ETL
Sbjct: 132 FSRMMSFVMLVTTIAPLMAPIVGGWVLVWLSWH--YIFWILALAAILASAMIFFLIKETL 189

Query: 193 PYPKRRVQW--RGIVINYAKLLTNQQVTSSASYNWLSYLASLVTLSILPFLLQKQLGMTA 250
           P P+RR  +  R  + N+A L  +++V S    +  S+      LS  PF+  +   +  
Sbjct: 190 P-PERRQPFHIRTTIGNFAALFRHKRVLSYMLASGFSFAGMFSFLSAGPFVYIEINHVAP 248

Query: 251 ADYGSTLIIPSSGLLLGSVLVNMLTSRFSVRQLLGCAISLMVFAGLWL--LLTEFSVFNL 308
            ++G    +     ++   ++ +  SRF VR++       M  +GLW+  ++  + V + 
Sbjct: 249 ENFGYYFALN----IVFLFVMTIFNSRF-VRRI---GALNMFRSGLWIQFIMAAWMVISA 300

Query: 309 IWAFTWLSIAQGISFPL---------ATTLLLSPHKSQAGAVSALSGSIQMGIAGLLGGY 359
           +    + S+  G++  +         A  ++L      AG  S+L+G+ + GI  ++G  
Sbjct: 301 LLGLGFWSLVVGVAAFVGCVSMVSSNAMAVILDEFPHMAGTASSLAGTFRFGIGAIVGAL 360

Query: 360 L 360
           L
Sbjct: 361 L 361