Pairwise Alignments

Query, 403 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 403 a.a., putative arabinose efflux transporter from Escherichia coli BL21

 Score =  122 bits (305), Expect = 2e-32
 Identities = 93/360 (25%), Positives = 164/360 (45%), Gaps = 37/360 (10%)

Query: 24  GQVGVSIYLPSLPLISRDLQVDQASAQMLVTLFLLGFGGSQLFYGALSDAVGRRPTFLLG 83
           G +   +YLP+   I  DLQ   ++    ++LFL GF  +QL +G LSD  GR+P  L+G
Sbjct: 18  GFLATDMYLPAFAAIQADLQTPASAVSASLSLFLAGFAAAQLLWGPLSDRYGRKPVLLIG 77

Query: 84  QGIYLLGTVLCVMMSDHFQALEFGRLLQGLGAGSASVLGRSVLRDSYDGFHLTKALSYLS 143
             I+ LG+ L ++  ++   L   R +Q +G  +A+V+ ++++ D Y    + +  + + 
Sbjct: 78  LTIFALGS-LGMLWVENAATLLVLRFVQAVGVCAAAVIWQALVTDYYPSQKVNRIFATIM 136

Query: 144 ITASIMPIIAPVLGGWLAYHLSWQSVFIFVLLYIGAIFTLGLMILPETLPYPK------- 196
               + P +AP+LG WL  H SWQ++F   L  I  +  L +  L  T            
Sbjct: 137 PLVGLSPALAPLLGSWLLVHFSWQAIFA-TLFAITVVLILPIFWLKPTTKARNNSQDGLT 195

Query: 197 -----RRVQWRGIVINYAKLLTNQQVTSSASYNWLSYLASLVTLSILPFLLQKQLGMTAA 251
                R   +RG V+ YA         S++ + WL+           PF+L  ++G + A
Sbjct: 196 FTDLLRSKTYRGNVLIYA-------ACSASFFAWLTG---------SPFIL-SEMGYSPA 238

Query: 252 DYGSTLIIPSSGLLLGSVLVNMLTSRFSVRQLLGCAISLMVFA--GLWL--LLTEFSVFN 307
             G + +  +   L+G         ++  +QLL   + L   +    W    ++  S+  
Sbjct: 239 VIGLSYVPQTIAFLIGGYGCRAALQKWQGKQLLPWLLVLFAVSVIATWAAGFISHVSLVE 298

Query: 308 LIWAFTWLSIAQGISFPLATTLLLSPHKSQAGAVSALSGSIQMGIAGLLGGYLVEHWVTS 367
           ++  F  ++IA G  +P+     L P     G  +AL  ++Q+G+  L    LV  W+ S
Sbjct: 299 ILIPFCVMAIANGAIYPIVVAQALRPFPHATGRAAALQNTLQLGLCFLAS--LVVSWLIS 356