Pairwise Alignments

Query, 295 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

 Score =  135 bits (340), Expect = 1e-36
 Identities = 90/288 (31%), Positives = 146/288 (50%), Gaps = 7/288 (2%)

Query: 10  YIKVVEEGSFNGAARKLNTTSSAVSKRIHWLEERIGVQLLKRTTRSVTQTEAGALFYQRA 69
           ++ VVE GSF+ AA +L   +SAVS+ +  LE ++GV LL RTTR ++ TE G  +++R 
Sbjct: 11  FVSVVESGSFSRAAEQLGQANSAVSRAVKKLEMKLGVSLLNRTTRQLSLTEEGERYFRRV 70

Query: 70  KAQLESWQSVVDETRSVNQTPAGLLRIGATLAVGSKFLMQYLDEFLQRYPDIRVQLITT- 128
           ++ L+   +   E      TP GLLRI A   V   FLM  +  F +RYP++ + L+++ 
Sbjct: 71  QSILQEMAAAESEIMETRNTPRGLLRIDAATPVVLHFLMPLIKPFRERYPEVTLSLVSSE 130

Query: 129 TPGQLPELHLDLFISREIEQLNSLSFKATPLFEYQAAFYASPSYLAKHGVPQTLQELTEH 188
           T   L E  +D+ I      L   S +A PLF       ASP Y++++G P+T+ +L +H
Sbjct: 131 TIINLIERKVDVAI--RAGTLTDSSLRARPLFNSYRKIIASPDYISRYGKPETIDDLKQH 188

Query: 189 NVLCWGEQTFRE---VKTAQGKRLTLTGNFATTNPEALFYAGKAGMGIIVTGHIMIKEEL 245
             L + E        +  + G+   +    ++ + E L     +G GI      MI +E+
Sbjct: 189 ICLGFTEPASLNTWPIARSDGQLHEVKYGLSSNSGETLKQLCLSGNGIACLSDYMIDKEI 248

Query: 246 KQGNLVRLLPDVTID-QATVYAYYPKLEYQHTRTQLFLDHLKQKLAVA 292
            +G LV L+ D  +  +    A Y       TR + F+D L + +  A
Sbjct: 249 ARGELVELMADKVLPVEMPFSAVYYSDRAVSTRIRAFIDFLSEHVKTA 296