Pairwise Alignments

Query, 607 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1247 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

 Score =  221 bits (562), Expect = 2e-61
 Identities = 144/428 (33%), Positives = 216/428 (50%), Gaps = 12/428 (2%)

Query: 175  QLRHEISHDNLTGLMNRNDLAEKLTALV---QEDRHHFTLAFLDIDEFRSINDLHGHYLG 231
            +L ++  HD LTGL NR     +L A +   QE      + FLD+D F+ IND  GH +G
Sbjct: 802  RLDYQAHHDPLTGLPNRTLFESRLQAALNGHQETGQQGAVLFLDLDRFKHINDSLGHPIG 861

Query: 232  DLVLKFVADAIKQAVPEEGYAFRIAADEFAFLTTDREPMKICQTILNKLAQDYIDQ---- 287
            DL+LK +A  +K+ + +     R+  DEF  L    +     Q + NKL   +       
Sbjct: 862  DLLLKDIAVRLKEQLRDIDTVARLGGDEFIILLPGLQHASDAQYLANKLLACFTPPFQAG 921

Query: 288  DRRLKISVSIGITKYSGEKLNADQLLFNASLALKECKRNHNTRIRFYDNLLSNQYYRRTQ 347
            +    IS SIG + Y  +  +   L+ NA  A+   K     R+  Y   L+ Q   R  
Sbjct: 922  EHEFFISASIGTSLYPEDGTDVATLVKNADAAMYRSKAKGRNRVESYTRDLTAQANERV- 980

Query: 348  IIEALRSELSKPIHQTELYVVVQPIVKKHQRNWDYFEILTRWNSSTLGVVTPLEFIEAAE 407
               AL  EL + I + EL +  QP +          E L RW+  T G V P  FI  AE
Sbjct: 981  ---ALEHELRRAIERDELSLYYQPKLSLATHELIGAEALIRWHHPTFGDVPPEHFIALAE 1037

Query: 408  QSGLIVEFGERILELACIAKQELEQGIDQKIRLSINCSADELTHSNRYLEHLLKTIKAYG 467
            ++G+I++ G+ +LE AC      +   D    LS+N +  +L H    L  + + +  Y 
Sbjct: 1038 ENGMILQIGDWVLEQACRQMHAWQGHFDDFGPLSVNLAGAQLRHPG-LLGRIKQLLHDYQ 1096

Query: 468  FQADEFTIELTETVLLSKAAEVCSILTILRELGFKIALDDFGTGYSSLNYIHSYPIDCIK 527
                   +E+TE  ++S+A E   +L  L++LG ++A+DDFGTGYSSL+Y+   P+D +K
Sbjct: 1097 LDPGRLQLEITENFIMSQAEEALDVLHQLKDLGVQLAIDDFGTGYSSLSYLKRLPLDFLK 1156

Query: 528  IDAAFVRNLLTNQTSESIVWLIIQLANQLKLDLVAEGVENQQALDKLYQMGCEQIQGYYF 587
            ID +FVR L  +    +IV  II L + ++  ++AEGVEN      L   GCEQ+QGY  
Sbjct: 1157 IDQSFVRGLPDDPHDAAIVRAIIALGHSMQFTIIAEGVENPAQQAFLAAEGCEQMQGYIV 1216

Query: 588  SRPDLPSV 595
            S P  P++
Sbjct: 1217 SLPLPPAL 1224