Pairwise Alignments

Query, 607 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1283 a.a., diguanylate phosphodiesterase from Pseudomonas simiae WCS417

 Score =  215 bits (548), Expect = 8e-60
 Identities = 149/479 (31%), Positives = 227/479 (47%), Gaps = 30/479 (6%)

Query: 124  NGENYGVLISTFTRQLDDFANLVLVHQILAQMIAHDLECKQMEVRSQSLINQLRHEISH- 182
            NGE+Y   +   T   DD  +L                C   ++  +    Q  H +++ 
Sbjct: 804  NGEHYPAWVG-ITAVFDDEGDLA------------SYVCFFSDISERKASEQRIHRLAYY 850

Query: 183  DNLTGLMNRNDLAEKL-TALVQEDRHH--FTLAFLDIDEFRSINDLHGHYLGDLVLKFVA 239
            D LT L NR    ++L TAL   +R      L FLD+D F+ IND  GH  GD +LK +A
Sbjct: 851  DALTHLPNRTLFQDRLHTALQAAERQKSWVVLMFLDLDRFKPINDSLGHAAGDRMLKEMA 910

Query: 240  DAIKQAVPEEGYAFRIAADEFAFLTTDR--------EPMKICQTILNKLAQDYIDQDRRL 291
              +   V E+    R+  DEF  L   R          + + + IL  L + ++ + R  
Sbjct: 911  TRLLGCVAEDDTVARMGGDEFTLLLQPRVNREMALNRAIHVAEQILASLVKPFVLEGREF 970

Query: 292  KISVSIGITKYSGEKLNADQLLFNASLALKECKRNHNTRIRFYDNLLSNQYYRRTQIIEA 351
             ++ SIGI     +     QL+ NA  A+   K       +FY   ++     R +    
Sbjct: 971  FVTASIGIALSPQDGNELSQLMKNADTAMYHAKERGKNNFQFYQADMNASALERLE---- 1026

Query: 352  LRSELSKPIHQTELYVVVQPIVKKHQRNWDYFEILTRWNSSTLGVVTPLEFIEAAEQSGL 411
            L S+L   + Q E  +  QP      +     E L RW     G+V P +FI   E+ GL
Sbjct: 1027 LESDLRHALEQNEFVLYYQPQFSGDGKRLTGAEALLRWRHPRRGLVPPGDFIPVLEELGL 1086

Query: 412  IVEFGERILELACIAKQELEQGIDQKIRLSINCSADELTHSNRYLEHLLKTIKAYGFQAD 471
            +V+ G+ ++  AC   +   Q   +  ++S+N SA + +   +    +   +K  G    
Sbjct: 1087 VVDVGDWVISEACRQLKTWHQNKVRVPKVSVNISARQFS-DGQLGTRIATILKDTGLPPA 1145

Query: 472  EFTIELTETVLLSKAAEVCSILTILRELGFKIALDDFGTGYSSLNYIHSYPIDCIKIDAA 531
               +ELTE++L+ +  E   IL  L+ LG  IA+DDFGTGYSSLNY+  +PID +KID  
Sbjct: 1146 CLELELTESILMREVNEAMQILDSLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLKIDRT 1205

Query: 532  FVRNLLTNQTSESIVWLIIQLANQLKLDLVAEGVENQQALDKLYQMGCEQIQGYYFSRP 590
            FV  L + +    I   II +A+ L L ++AEGVE  + LD L + GC+++QGY F RP
Sbjct: 1206 FVDGLPSGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLDFLREHGCDEVQGYLFGRP 1264