Pairwise Alignments

Query, 607 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 746 a.a., Response regulator/GGDEF/EAL domain protein from Variovorax sp. SCN45

 Score =  209 bits (531), Expect = 4e-58
 Identities = 151/496 (30%), Positives = 241/496 (48%), Gaps = 24/496 (4%)

Query: 116 LGIPIYFSNGENYGVLISTFTRQLDDFANLV----LVHQILAQMIAHDLECKQME--VRS 169
           LG  +Y   GE+ GV +    +   D A  +    L   +  Q++  D+ C  +   + S
Sbjct: 250 LGCNVY---GEDGGVALHIGRKDDQDMAVFIDTTGLRGTVDRQLL--DVFCVNLSTLLHS 304

Query: 170 QSLINQLRHEISHDNLTGLMNRNDLAEKLTALVQEDRHHFTLAFLDIDEFRSINDLHGHY 229
           + L+ +L     +D L  L NR    EK+    ++      LA +DID+F + ND+ GH 
Sbjct: 305 RGLLERLHEYAYYDPLVRLPNRTHFVEKVDDCARQGMRDHILALVDIDDFSATNDVMGHR 364

Query: 230 LGDLVLKFVADAIKQAVPEEGYAFRIAADEFAFL--TTDREPMKICQTILNKLAQDYIDQ 287
            GD +L+ VA  +  A+P E    R+ AD F  L       P ++ + +   LA D +  
Sbjct: 365 FGDRLLETVARRLADALPAEVVLARLGADTFGVLGPVGQVSPTQLLECVRQPLAVDGVPH 424

Query: 288 DRRLKISVSIGITKYSGEKLNADQLLFNASLALKECKRNHNTRIRFYDNLLSNQYYRRTQ 347
               K+S++ G      +      L+ +A++ALK  KR+H  +   Y   +  +   R  
Sbjct: 425 ----KVSLTCGYVLLPEDAQAGVDLVKDATIALKRAKRDHRGQHLQYSGHMGTEARARAL 480

Query: 348 IIEALRSELSKPIHQTELYVVVQPIVKKHQRNWDYFEILTRWNSSTLGVVTPLEFIEAAE 407
           ++  LR+     I   +L++V QP +  + R     E L RW +    +V P  FI  AE
Sbjct: 481 LLSNLRAA----IDNAQLFLVYQPQIDLNTRALVGLEALLRWRADDGNLVPPDRFIPVAE 536

Query: 408 QSGLIVEFGERILELACIAKQELEQGIDQKIRLSINCSADELTHSNRYLEHLLKTIKAYG 467
            SGLIV  G+ +L  AC+  +EL       +R+++N S  +L     + E +   +    
Sbjct: 537 HSGLIVALGQWVLSTACMTMRELLDAGCAPLRMAVNVSTVQLRDPG-FFETVRAALSHSR 595

Query: 468 FQADEFTIELTETVLLSKAAEVCSILTILRELGFKIALDDFGTGYSSLNYIHSYPIDCIK 527
            Q     +E+TE+V +     + S LT LR  G  IA+DDFGTGYSSL+Y+   P+D IK
Sbjct: 596 LQGSHLELEITESVAVLPTQLLESTLTALRAEGISIAIDDFGTGYSSLSYLERLPLDRIK 655

Query: 528 IDAAFVRNLLTNQTSESIVWLIIQLANQLKLDLVAEGVENQQALDKLYQMGCEQIQGYYF 587
           ID  FVR L   Q +  I  +++QL  +L L ++AEG+E+  A   L  M C + QGY  
Sbjct: 656 IDGTFVRQLSETQGAR-IAEMVVQLGRKLGLHVLAEGIEDDAAWQALLAMDCNEGQGYCI 714

Query: 588 SRPDLPSVMIERWRKE 603
           + P +    + RW ++
Sbjct: 715 A-PPMDKDSLFRWLQQ 729