Pairwise Alignments

Query, 607 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 865 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score =  219 bits (558), Expect = 4e-61
 Identities = 146/448 (32%), Positives = 229/448 (51%), Gaps = 21/448 (4%)

Query: 168 RSQSLINQLRHEISHDNLTGLMNRNDLAEKLTALVQEDRH---HFTLAFLDIDEFRSIND 224
           RSQ+ + +L     +D+LTGL NR  + + L   V   R       L  LD+D F+S+ND
Sbjct: 332 RSQAEVTRLAQ---YDSLTGLANRVQMLQALEQAVLGSRGKQGECALMMLDLDRFKSVND 388

Query: 225 LHGHYLGDLVLKFVADAIKQAVPEEGYAFRIAADEFAFLTTDREPMK----ICQTILNKL 280
             GH  GD +L+ V+  +++ V  +G   R   DEF  L   R        + Q I++ L
Sbjct: 389 TLGHPAGDALLRQVSQRLQRVVGNQGLVGRQGGDEFKVLVHGRHDRNRLGLLAQAIISAL 448

Query: 281 AQDYIDQDRRLKISVSIGITKYSGEKLNADQLLFNASLALKECKRNHNTRIRFYDNLLSN 340
           +Q Y  +   + I VSIGI+    + + AD L+ NA LAL + K +     RFY   +  
Sbjct: 449 SQPYSIEGTGVVIGVSIGISFCPEDGVTADALIRNADLALYKAKGDGRGVYRFYSADMHA 508

Query: 341 QYYRRTQIIEALRSELSKPIHQTELYVVVQPIVKKHQRNWDYFEILTRWNSSTLGVVTPL 400
               R Q+ + LR  L+       L++V QPIV         +E L RW+    G ++P 
Sbjct: 509 DAEDRRQLEQDLRHALTAD----GLHLVYQPIVSSTTERITGYEALLRWDHPVRGAISPA 564

Query: 401 EFIEAAEQSGLIVEFGERILELACIAKQELEQGIDQKIRLSINCSADELTHSNRYLEHLL 460
            F+  AE SGLI   GE ++  AC    + + GI    R+++N SA +  +   +   ++
Sbjct: 565 LFVPIAEDSGLIAPIGEWVMRTACRDAAQWDAGI----RVAVNVSAMQFANPG-FPTTVM 619

Query: 461 KTIKAYGFQADEFTIELTETVLLSKAAEVCSILTILRELGFKIALDDFGTGYSSLNYIHS 520
           + + +     +   +E+TE+V L+      ++ T L+ LG ++ LDDFGTGYSSL Y+  
Sbjct: 620 QALASAQLAPERLELEITESVFLNDNDGTDAMFTRLKGLGVRLVLDDFGTGYSSLGYLKK 679

Query: 521 YPIDCIKIDAAFVRN-LLTNQTSESIVWLIIQLANQLKLDLVAEGVENQQALDKLYQMGC 579
            P D IKID +FVR   +    + +I+  I+ LA  L +D  AEG E +  LD + Q+GC
Sbjct: 680 APFDKIKIDQSFVRGAAIRGSRNSAIIKAIVSLAEALGMDTTAEGAETRDELDLIRQLGC 739

Query: 580 EQIQGYYFSRPDLPSVMIERWRKETNVA 607
             IQGY + RP +P+  +   ++   V+
Sbjct: 740 SHIQGYIYGRP-MPAAQVLEGQRANGVS 766