Pairwise Alignments

Query, 607 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 695 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  221 bits (563), Expect = 8e-62
 Identities = 153/474 (32%), Positives = 248/474 (52%), Gaps = 28/474 (5%)

Query: 128 YGVLISTFTRQLDDFANLVLVHQILAQMIAHDLECKQMEV-RSQSLINQLRHEIS-HDNL 185
           Y VLI+T           VL   +L  ++   LE +  E+ RS +L NQ   +++ HD L
Sbjct: 218 YLVLITTLA---------VLAVALLTSVLDARLEARTAELARSLTLANQELTQLALHDTL 268

Query: 186 TGLMNRNDLAEKLT---ALVQEDRHHFTLAFLDIDEFRSINDLHGHYLGDLVLKFVADAI 242
           T L NR  LA+++    A V E    F L F+D+D F+ +ND  GH++GDL+LK VA  +
Sbjct: 269 TDLPNRTLLADRIEQAIAKVAEQGGCFALMFIDLDGFKPVNDAFGHHIGDLLLKAVAARL 328

Query: 243 KQAVPEEGYAFRIAADEFAFLTTDREP---MKICQTILNKLAQDYIDQDRRLKISVSIGI 299
           +  +  +    RI  DEF  L   +EP   M +    +N +++ +   +  L++S S+GI
Sbjct: 329 RGHLHSQDTLARIGGDEFVLLVELQEPNDAMDVAVKQVNLVSRPFRVAEHDLQLSASLGI 388

Query: 300 TKYSGEKLNADQLLFNASLALKECKRNHNTRIRFYDNLLSNQYYRRTQIIEALRSELSKP 359
             Y G   +  +LL NA  A+   K        F+D  +++   ++ Q+++ LR  L   
Sbjct: 389 VLYPGNGQDQHELLRNADAAMYHAKSAGKNGYSFFDVSMNSNARQQLQLLQDLRLALE-- 446

Query: 360 IHQTELYVVVQPIVKKHQRNWDYFEILTRWNSSTLGVVTPLEFIEAAEQSGLIVEFGERI 419
             Q +  +  QP            E L RW     G++ P  FI  AE++GLI+  GE +
Sbjct: 447 --QRQFRLHYQPKFDAQACQPIGAEALLRWEHPQQGLLLPDRFIGLAEKTGLIIPIGEWV 504

Query: 420 LELACIAKQELEQGIDQKI---RLSINCSADELTHSNRYLEHLLKTIKAYGFQADEFTIE 476
           L  AC   +++ Q +DQ     R+++N SA +  H+   ++ + + ++  G  A+  T+E
Sbjct: 505 LTEAC---RQMRQWLDQGHHGWRMAVNLSAIQFCHAG-LVDSVARALQQNGLPANCLTLE 560

Query: 477 LTETVLLSKAAEVCSILTILRELGFKIALDDFGTGYSSLNYIHSYPIDCIKIDAAFVRNL 536
           +TET  +  A    ++L  L ++G  +++DDFGTGYSSL Y+   P + +KID  FVR+L
Sbjct: 561 ITETTAMHDADASLTVLQRLSDMGVDLSIDDFGTGYSSLMYLKRLPANELKIDRGFVRDL 620

Query: 537 LTNQTSESIVWLIIQLANQLKLDLVAEGVENQQALDKLYQMGCEQIQGYYFSRP 590
             +    +IV  I+ L   L L +VAEGVE  +  D L ++GC+ +QGY   +P
Sbjct: 621 EQDSDDAAIVSAIVALGQALGLRIVAEGVETDKQQDFLTRLGCDSLQGYLLGQP 674