Pairwise Alignments

Query, 607 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1276 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  211 bits (536), Expect = 2e-58
 Identities = 141/444 (31%), Positives = 219/444 (49%), Gaps = 23/444 (5%)

Query: 162  CKQMEVRSQSLINQLRHEISH-DNLTGLMNRNDLAEKL-TALVQEDRHH--FTLAFLDID 217
            C   ++  +    Q  H +++ D LT L NR    ++L  AL Q +R      L FLD+D
Sbjct: 822  CFFTDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLYNALQQAERQKAWVVLMFLDLD 881

Query: 218  EFRSINDLHGHYLGDLVLKFVADAIKQAVPEEGYAFRIAADEFAFLTTDR--------EP 269
             F+ IND  GH  GD +LK +A  +   V ++    R+  DEF  L   R          
Sbjct: 882  RFKPINDSLGHAAGDRMLKDMALRLLACVDDDDTVARMGGDEFTLLLQPRPTREMALNRA 941

Query: 270  MKICQTILNKLAQDYIDQDRRLKISVSIGITKYSGEKLNADQLLFNASLALKECKRNHNT 329
            + + + IL  L + ++ ++R   ++ SIGI     +     QL+ NA  A+   K     
Sbjct: 942  IHVAENILGSLVRPFVLENREFFVTASIGIALSPQDGSELSQLMKNADTAMYHAKERGKN 1001

Query: 330  RIRFYDNLLSNQYYRRTQIIEALRSELSKPIHQTELYVVVQPIVKKHQRNWDYFEILTRW 389
              +FY   ++     R +    L S+L   + Q E  +  QP      +     E L RW
Sbjct: 1002 NFQFYQAEMNASALERLE----LESDLRHAMEQNEFILYYQPQFSGDGKRLTGAEALLRW 1057

Query: 390  NSSTLGVVTPLEFIEAAEQSGLIVEFGERILELACIAKQELEQGIDQKIRL---SINCSA 446
               T G+V P +FI   E+ GL+V+ G+ +L  A    ++L+     K+R+   S+N SA
Sbjct: 1058 RHPTRGLVPPGDFIPVIEELGLVVDVGDWVLREA---SRQLKAWHKAKVRVPKVSVNISA 1114

Query: 447  DELTHSNRYLEHLLKTIKAYGFQADEFTIELTETVLLSKAAEVCSILTILRELGFKIALD 506
             + +   +    +   ++  G       +ELTE++L+ +  E   IL  L+ LG  IA+D
Sbjct: 1115 RQFS-DGQLGTRIANILEESGLPPACLELELTESILMREVNEALQILASLKNLGLSIAVD 1173

Query: 507  DFGTGYSSLNYIHSYPIDCIKIDAAFVRNLLTNQTSESIVWLIIQLANQLKLDLVAEGVE 566
            DFGTGYSSLNY+  +PID +KID  FV  L   +    I   II +A+ L L ++AEGVE
Sbjct: 1174 DFGTGYSSLNYLKQFPIDVLKIDRTFVDGLPEGEQDAQIARAIIAMAHSLNLAVIAEGVE 1233

Query: 567  NQQALDKLYQMGCEQIQGYYFSRP 590
              + L+ L + GC+++QGY F RP
Sbjct: 1234 THEQLEFLREHGCDEVQGYLFGRP 1257