Pairwise Alignments

Query, 607 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1247 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  229 bits (584), Expect = 5e-64
 Identities = 148/425 (34%), Positives = 220/425 (51%), Gaps = 16/425 (3%)

Query: 175  QLRHEISHDNLTGLMNRNDLAEKLTALV---QEDRHHFTLAFLDIDEFRSINDLHGHYLG 231
            +L ++  HD LTGL NR     +L  ++   Q       + FLD+D F+ IND  GH +G
Sbjct: 802  KLDYQAHHDPLTGLPNRTLFENRLQGVLTCAQVSNRQGAVLFLDLDRFKHINDSLGHPVG 861

Query: 232  DLVLKFVADAIKQAVPEEGYAFRIAADEFAFLTTDREPMKICQTILNKLAQ----DYIDQ 287
            DL+LK +A  +K+ V +     R+  DEF  L           TI NKL       +   
Sbjct: 862  DLLLKGIAQRLKEQVRDVDTVARLGGDEFIILLPGLHKPSDASTIANKLLACFNAPFQAG 921

Query: 288  DRRLKISVSIGITKYSGEKLNADQLLFNASLALKECKRNHNTRIRFYDNLLSNQYYRRTQ 347
            +     S SIGI+ Y  +  +   L+ NA  A+   K     R+  Y   L+ Q   R  
Sbjct: 922  EHEFFTSASIGISLYPQDGTDVSTLIRNADAAMYRSKAKGRNRVEAYTRDLTAQASERI- 980

Query: 348  IIEALRSELSKPIHQTELYVVVQPIVKKHQRNWDYFEILTRWNSSTLGVVTPLEFIEAAE 407
               AL  EL + + + E+ +  QP +    ++    E L RW+  T G V P  FI  AE
Sbjct: 981  ---ALEHELRRAVERNEMSLCFQPKLSLKTQSLVGAEALIRWSHPTFGEVPPEHFIHLAE 1037

Query: 408  QSGLIVEFGERILELACIAKQELEQGIDQKIRLSINCSADELTHSN--RYLEHLLKTIKA 465
            ++G I++ G+ +LE AC   Q  +Q       LSIN +  +L H +  R +E LLK    
Sbjct: 1038 ENGTILQLGDWVLEQACRQMQAWKQHYQPFGPLSINLAGAQLRHPHLARRIEQLLKH--- 1094

Query: 466  YGFQADEFTIELTETVLLSKAAEVCSILTILRELGFKIALDDFGTGYSSLNYIHSYPIDC 525
            +  +A +  +E+TE  ++S+A E  ++L  L++LG ++A+DDFGTGYSSL+Y+   P+D 
Sbjct: 1095 HQLKAGDLQLEITENFIMSQAEEALAVLYQLKKLGVQLAIDDFGTGYSSLSYLKRLPLDI 1154

Query: 526  IKIDAAFVRNLLTNQTSESIVWLIIQLANQLKLDLVAEGVENQQALDKLYQMGCEQIQGY 585
            +KID +F+R L  +    +I   II L   ++L ++AEGVENQ     L   GCEQIQGY
Sbjct: 1155 LKIDKSFIRGLPDDPHDAAIARAIIALGRSMQLTIIAEGVENQAQQRFLAAEGCEQIQGY 1214

Query: 586  YFSRP 590
              S P
Sbjct: 1215 IVSLP 1219