Pairwise Alignments

Query, 607 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 860 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Enterobacter asburiae PDN3

 Score =  211 bits (538), Expect = 8e-59
 Identities = 131/416 (31%), Positives = 218/416 (52%), Gaps = 16/416 (3%)

Query: 182 HDNLTGLMNRNDLAEKLTA-LVQEDRHHFTLAF--LDIDEFRSINDLHGHYLGDLVLKFV 238
           HD LTGL NR  + E L   L +ED +H+  A   LD+D+F+ +ND+ GH  GD +L  V
Sbjct: 439 HDELTGLPNRYHIKEFLAGKLAKEDLNHYPFAMICLDLDKFKPVNDIFGHSTGDALLGEV 498

Query: 239 ADAIKQAVPEEGYAFRIAADEFAFL---TTDREPMK-ICQTILNKLAQDYIDQDRRLKIS 294
           A  +K  V    +  R   DEF  L   T+ ++ ++ +C+ I+ +L + +  +   + I 
Sbjct: 499 ASRLKNCVRRGDFVARQGGDEFMLLLGNTSQQDQIEEVCRRIVQELNRPFAIEGNDVAIG 558

Query: 295 VSIGITKYSGEKLNADQLLFNASLALKECKRNHNTRIRFYDNLLSNQYYRRTQIIEALRS 354
           VS+GI     +  +A+ LL  A +AL + K++   R  +Y   +S +   R +    L  
Sbjct: 559 VSMGIALAPRDSSSANDLLRYADIALYQAKQSGRNRWVYYRPDMSEKLTERRK----LEL 614

Query: 355 ELSKPIHQTELYVVVQPIVKKHQRNWDYFEILTRWNSSTLGVVTPLEFIEAAEQSGLIVE 414
           EL   I + +LY+V QP         D  E L RW     G + P +FI  AE++GLI+ 
Sbjct: 615 ELKTAIREEQLYLVYQPRYNLRYSTIDAVEALVRWQHPARGTIMPDQFIPLAEETGLIIS 674

Query: 415 FGERILELACIAKQELEQGIDQKIRLSINCSADELTHSNRYLEHLLKTIKAYGFQADEFT 474
               ++  AC   ++   G+     +S+N SA E   S+   E + + ++  G + +   
Sbjct: 675 LSNWVIRKACAETKDKLPGLS----VSVNISAIEFQASD-LAERIKEILRETGLEPNRLE 729

Query: 475 IELTETVLLSKAAEVCSILTILRELGFKIALDDFGTGYSSLNYIHSYPIDCIKIDAAFVR 534
           IE+TE V LS   +    +  L+++G +I +DDFGTGY+SL+Y+  +  D +K+D +F+ 
Sbjct: 730 IEVTENVTLSDPEKTLQTMKSLKKMGVRILIDDFGTGYASLSYLRKFQFDGLKLDKSFIF 789

Query: 535 NLLTNQTSESIVWLIIQLANQLKLDLVAEGVENQQALDKLYQMGCEQIQGYYFSRP 590
            L  +  ++S+V  II L     + + AEGVE  + L  L +  C+++QGY   +P
Sbjct: 790 TLGDSPQNQSVVEKIIDLGKAYSMAVTAEGVETAEQLSFLKKNKCDEVQGYLLGKP 845