Pairwise Alignments

Query, 607 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 748 a.a., PAS-family GGDEF/EAL family protein from Caulobacter crescentus NA1000 Δfur

 Score =  220 bits (561), Expect = 1e-61
 Identities = 142/430 (33%), Positives = 223/430 (51%), Gaps = 19/430 (4%)

Query: 168 RSQSLINQLRHEISHDNLTGLMNRNDLAEKL-TALVQEDRHHFTLA--FLDIDEFRSIND 224
           R+++ I +L H   +D LT L NR    + L  AL +  R    LA  F+D+D F+++ND
Sbjct: 270 RAEAQIARLAH---YDPLTDLPNRVLFQKSLGEALARRSRKGDALAVHFVDLDRFKTVND 326

Query: 225 LHGHYLGDLVLKFVADAIKQAVPEEGYAFRIAADEFAFLTTDREPM----KICQTILNKL 280
             GH LGD +LK  A+ ++  V E     R+  DEFA + T  +      ++   I+  +
Sbjct: 327 TLGHPLGDALLKIAAERLRGCVREGDTVARLGGDEFAIVQTGLDDSNGATRLAARIVEAM 386

Query: 281 AQDYIDQDRRLKISVSIGITKYSGEKLNADQLLFNASLALKECKRNHNTRIRFYDNLLSN 340
           A  +  Q   + I  S+G++    +  +AD+LL  A +AL   K +      F++  +  
Sbjct: 387 AAPFDLQGHHVVIGASVGVSLAPTDGDDADELLKKADMALYRAKADGRGAYHFFERAMDE 446

Query: 341 QYYRRTQIIEALRSELSKPIHQTELYVVVQPIVKKHQRNWDYFEILTRWNSSTLGVVTPL 400
           Q   R     AL  +L + +   E  +  QP+           E L RW     G+V+P 
Sbjct: 447 QLQAR----RALELDLRRALQAGEFELFYQPLYHLGDERVTGCEALLRWRHPERGMVSPA 502

Query: 401 EFIEAAEQSGLIVEFGERILELACIAKQELEQGIDQKIRLSINCSADELTHSNRYLEHLL 460
           +FI  AE+ GLIV+ GE +L  AC       +     +RL++N S  +       +  ++
Sbjct: 503 DFIPLAEEIGLIVQLGEWVLRRACAEAANWPE----HVRLAVNLSPAQF-RDRGLVRTVV 557

Query: 461 KTIKAYGFQADEFTIELTETVLLSKAAEVCSILTILRELGFKIALDDFGTGYSSLNYIHS 520
             + A G  A    +E+TE+VLL  +    ++L  L+ LG +I++DDFGTGYSSL+Y+ S
Sbjct: 558 SALAASGLPAQRLELEITESVLLQDSQANMTMLHDLKALGVRISMDDFGTGYSSLSYLRS 617

Query: 521 YPIDCIKIDAAFVRNLLTNQTSESIVWLIIQLANQLKLDLVAEGVENQQALDKLYQMGCE 580
           +P D IKID  FVR++L +  + +I+  ++ L   + +   AEGVE Q  LD L Q GC 
Sbjct: 618 FPFDKIKIDQTFVRDILHDSDAMAIIKAVLDLGASMGVVTTAEGVETQAQLDALRQQGCA 677

Query: 581 QIQGYYFSRP 590
           +IQGY+ SRP
Sbjct: 678 EIQGYFISRP 687