Pairwise Alignments

Query, 607 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 644 a.a., diguanylate cyclase from Agrobacterium fabrum C58

 Score =  219 bits (559), Expect = 2e-61
 Identities = 135/454 (29%), Positives = 244/454 (53%), Gaps = 25/454 (5%)

Query: 156 IAHDLECKQMEVRSQSLINQLRHEISHDNLTGLMNRNDLAEKLTALVQEDRHHF------ 209
           +  DL    +E++++++  +L H+  HD LTGL NR+   ++L   ++  R  F      
Sbjct: 204 LTDDLRAATLELQAKNV--RLEHDAYHDALTGLPNRSLFRQEL---IERLRRSFGGTGTT 258

Query: 210 TLAFLDIDEFRSINDLHGHYLGDLVLKFVADAIKQAVPEEGYAFRIAADEFAFLTTDREP 269
            +  LD+D F+ +ND  GH  GD +L+ VA  +     +     R+  DEFA ++ D   
Sbjct: 259 AILLLDLDGFKDVNDTLGHDAGDALLQAVAQRLSAIGGDYDMVCRLGGDEFAVVSDDLNE 318

Query: 270 ---MKICQTILNKLAQDYIDQDRRLKISVSIGITKYSGEKLNADQLLFNASLALKECKRN 326
               ++   +++++++ Y   ++ +KI   IGI    G  ++AD+L   A LAL E K  
Sbjct: 319 DAARRLSTKLIDQISRTYQLGEQEVKIGTCIGIAISHGA-VDADELFKRADLALYEAKAI 377

Query: 327 HNTRIRFYDNLLSNQYYRRTQIIEALRSELSKPIHQTELYVVVQPIVKKHQRNWDYFEIL 386
              R   +   +  Q   +    ++  ++L   +   E+ V  QP V    R    FE L
Sbjct: 378 GPGRASVFKVRMQKQLTEK----KSFEADLQTALQNDEMEVYYQPQVATQTRKLCGFEAL 433

Query: 387 TRWNSSTLGVVTPLEFIEAAEQSGLIVEFGERILELACIAKQELEQGIDQKIRLSINCSA 446
            RW     G V P  FI  AE++GLI   G+ ++E AC        G D+ +++++N S 
Sbjct: 434 LRWKHPVRGDVPPSVFIPVAERTGLIHSLGKWVMETAC----REAMGWDEDMKVAVNLSP 489

Query: 447 DELTHSNRYLEHLLKTIKAYGFQADEFTIELTETVLLSKAAEVCSILTILRELGFKIALD 506
            +  HS   +++++  ++  G +     +E+TE++LL+K+ +  + L+ L+ +G KIA+D
Sbjct: 490 VQF-HSTNLIQNVMGALEKSGLEPSRLELEITESILLNKSDQTINTLSRLKAVGIKIAMD 548

Query: 507 DFGTGYSSLNYIHSYPIDCIKIDAAFVRNLLTNQTSESIVWLIIQLANQLKLDLVAEGVE 566
           DFGTGYSSL  +   P D IKID +F+R++ +++ + +IV  ++ +   L++  +AEG+E
Sbjct: 549 DFGTGYSSLANLRGVPFDKIKIDRSFLRDITSDRDALAIVEFVVGVGRSLRMTTIAEGIE 608

Query: 567 NQQALDKLYQMGCEQIQGYYFSRPDLPSVMIERW 600
            ++  + + ++GC+Q+QGY  SRP LP+  +  W
Sbjct: 609 TEEQYECVRRLGCDQVQGYLISRP-LPAKELVAW 641