Pairwise Alignments

Query, 607 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 694 a.a., GGDEF family protein from Agrobacterium fabrum C58

 Score =  220 bits (560), Expect = 2e-61
 Identities = 138/431 (32%), Positives = 224/431 (51%), Gaps = 21/431 (4%)

Query: 169 SQSLINQLRHEISHDNLTGLMNRNDLAEKLTALVQEDRH-----HFTLAFLDIDEFRSIN 223
           +Q  + + RH   HD LTG+ NR    E L    +  RH     H  L  +D+D F+ IN
Sbjct: 242 TQQAVARYRHLSLHDPLTGIPNRAAFIEHLN---RRTRHISMGAHTALLSIDLDRFKEIN 298

Query: 224 DLHGHYLGDLVLKFVADAIKQAVPEEGYAFRIAADEFAFLT----TDREPMKICQTILNK 279
           D+HGH  GD VL+ +AD     +    +  R+  DEF  +T    T  +  +  Q ++ +
Sbjct: 299 DVHGHAAGDAVLRAIADRASSVLKAGEFLARMGGDEFVAMTHSYYTRADGAEFAQRLIEQ 358

Query: 280 LAQDYIDQDRRLKISVSIGITKYSGEKLNADQLLFNASLALKECKRNHNTRIRFYDNLLS 339
           +++      +   +  S+GI+  +   ++AD L+  A +A+   K   +  I FYD  + 
Sbjct: 359 ISKPVEWNGQTFSVGASVGISVRNTGSIDADTLMAQADVAMYRAKSATSDTICFYDKSMD 418

Query: 340 NQYYRRTQIIEALRSELSKPIHQTELYVVVQPIVKKHQRNWDYFEILTRWNSSTLGVVTP 399
                R  +  A+RS L+   ++ ELY   Q   K        FE L RW     G+V+P
Sbjct: 419 EAARARNALAIAMRSGLAN--NEFELYYQQQNDTKSGSIVG--FEALLRWKHPERGMVSP 474

Query: 400 LEFIEAAEQSGLIVEFGERILELACIAKQELEQGIDQKIRLSINCSADELTHSNRYLEHL 459
           +EFI  AEQ+G IVE GE +L  AC      ++ +     +++N +  +L   N + + +
Sbjct: 475 VEFIPIAEQTGFIVELGEWVLREACAQAARWKKSL----AIAVNVAPQQLA-DNDFPDKV 529

Query: 460 LKTIKAYGFQADEFTIELTETVLLSKAAEVCSILTILRELGFKIALDDFGTGYSSLNYIH 519
            + +   G   +   +E+TE  +++        +  L+ LG KIA+DD+GTGYSSL+ + 
Sbjct: 530 ERILAETGLAPERLELEITEGSIIADHRHALVTIRKLKSLGVKIAMDDYGTGYSSLSTLQ 589

Query: 520 SYPIDCIKIDAAFVRNLLTNQTSESIVWLIIQLANQLKLDLVAEGVENQQALDKLYQMGC 579
           S+P D IKID AF+  L TN  SE+IV   + LA+ L + ++AEGVE +  ++ L + GC
Sbjct: 590 SFPFDKIKIDRAFIDGLSTNVQSEAIVRSTLILAHSLNIPVLAEGVETKAHIEFLRREGC 649

Query: 580 EQIQGYYFSRP 590
            Q+QG++F +P
Sbjct: 650 LQVQGFFFGKP 660