Pairwise Alignments

Query, 366 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 340 a.a., Regulator of RpoS from Xanthobacter sp. DMC5

 Score = 92.0 bits (227), Expect = 2e-23
 Identities = 59/168 (35%), Positives = 92/168 (54%), Gaps = 26/168 (15%)

Query: 208 RVLALTDPLTGLENR-------TAMFAELERHRRSGGFSLFLLDLNGFKQINDTYGHQMG 260
           R +A  D LTGL NR       T   A+ +RH R   F+L  +D++GFKQ+ND +GH +G
Sbjct: 163 RHMATHDALTGLGNRILFVEHLTRARAQAQRHGRE--FALLYIDIDGFKQVNDRHGHGVG 220

Query: 261 DAVLKQVAYRLNNSIPSFDYRVFRMGGDEFAIILSSINSTE----------QMMMQRMIK 310
           D +L  +A RL  ++   D+ V R+ GDEFA+I+  +   +          +M+ +  I 
Sbjct: 221 DKLLCAIANRLRGNLRQEDFAV-RLSGDEFAVIMVDLTDGDAAHAQGQRLCEMLREPYIV 279

Query: 311 QCFDHEFELSGDLRAKLNTSVGVSTYPLDSTNLSQLIHLADKNMYEMK 358
              D  + +S      +  S+G++ YP  ST+ ++LI LAD  MYE+K
Sbjct: 280 SYNDQAYTVS------VGASIGIALYPRHSTDENELIRLADTAMYEVK 321