Pairwise Alignments

Query, 366 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 619 a.a., GGDEF domain protein from Variovorax sp. SCN45

 Score = 85.9 bits (211), Expect = 3e-21
 Identities = 56/155 (36%), Positives = 81/155 (52%), Gaps = 4/155 (2%)

Query: 213 TDPLTGLENRTAMFAELERHRRSGG-FSLFLLDLNGFKQINDTYGHQMGDAVLKQVAYRL 271
           TD LTG  +R    +  E     G  F+L LLDL+GFK +ND +GH  GD VL  +A RL
Sbjct: 439 TDALTGAASRAGFESRGEEWLHQGQPFALMLLDLDGFKGVNDAHGHAAGDQVLIAIAQRL 498

Query: 272 NNSIPSFDYRVFRMGGDEFAIILSSINSTEQM-MMQRMIKQCFDHEFELSGDLRAKLNTS 330
              +   D  V R+GGDEFA+++    S E + +M R + +      E  G     +  S
Sbjct: 499 RQQLRKDDV-VARLGGDEFAVLVLGAPSREVLSLMARRMIEAGSQPVEYEG-RSVTVGMS 556

Query: 331 VGVSTYPLDSTNLSQLIHLADKNMYEMKFLQKSPS 365
           +G++  P D   L++L+  AD+ MY +K     PS
Sbjct: 557 LGIACRPGDGDTLARLLRAADRAMYHVKQHDAGPS 591