Pairwise Alignments

Query, 366 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 564 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Sphingobium sp. HT1-2

 Score = 91.3 bits (225), Expect = 6e-23
 Identities = 60/164 (36%), Positives = 86/164 (52%), Gaps = 12/164 (7%)

Query: 206 HHRVLALTDPLTGLENRTAMFAELER----HRRSGGFSLFLLDLNGFKQINDTYGHQMGD 261
           H + LAL D +TGL NRT+   ++ER       +G  +LF +DL+GFK +NDT GH  GD
Sbjct: 115 HVQTLALFDQVTGLANRTSFCRQVERLLVERGGAGPAALFFIDLDGFKAVNDTLGHAAGD 174

Query: 262 AVLKQVAYRLNNSIPS------FDYRVFRMGGDEFAIILSSINSTE-QMMMQRMIKQCFD 314
            +L +VA RL   + +       D  + R+ GDEF +   ++ S E    + R I+    
Sbjct: 175 QLLARVAGRLREVVMAQVSAGLGDAVIGRLAGDEFTMFFPALPSREAATRIARAIQFALG 234

Query: 315 HEFELSGDLRAKLNTSVGVSTYPLDSTNLSQLIHLADKNMYEMK 358
             FEL G     L  S+G++ YP    +LS L+  AD  MY  K
Sbjct: 235 ERFEL-GSQHVDLGASIGIACYPDHGDSLSALLRSADIAMYHAK 277