Pairwise Alignments

Query, 366 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 459 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score = 91.3 bits (225), Expect = 5e-23
 Identities = 63/173 (36%), Positives = 92/173 (53%), Gaps = 10/173 (5%)

Query: 194 GLVSFILHKEATHHRV--LALTDPLTGLENRTAMFAE----LERHRRSGG-FSLFLLDLN 246
           G++  I  ++    R+  LA  D LTGL NR  +       L R RR GG  ++  +DL+
Sbjct: 261 GILRDISERKENEERIKRLAHHDTLTGLPNRNLLNDRISHALARVRRHGGRMAVLYVDLD 320

Query: 247 GFKQINDTYGHQMGDAVLKQVAYRLNNSIPSFDYRVFRMGGDEFAIILSSINST-EQMMM 305
            FK INDT GH+ GDAVLK+VA RL+N + S D  V R+GGDEF +++  I    E  M+
Sbjct: 321 KFKPINDTLGHEAGDAVLKEVARRLDNCVRSSD-TVSRVGGDEFVVVVEEIGRPGEAAMV 379

Query: 306 QRMIKQCFDHEFELSGDLRAKLNTSVGVSTYPLDSTNLSQLIHLADKNMYEMK 358
            R I +          D    +  S+G++ +P D   + ++   AD  MY +K
Sbjct: 380 ARKIIEALGTPVPYE-DHSCLVGASIGIAVFPDDGNTMEEVSKAADVAMYRVK 431