Pairwise Alignments

Query, 366 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 379 a.a., GGDEF family protein from Agrobacterium fabrum C58

 Score = 86.3 bits (212), Expect = 1e-21
 Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 5/178 (2%)

Query: 183 FALILLTFSCVGLVSFILHKEATHHRVLAL--TDPLTGLENRTAMFAELERHRRSGGFSL 240
           F +I+L F+ + L   +L  E +  ++L L  TDPLTG++NR   F  +         ++
Sbjct: 192 FFIIMLNFA-ISLFVMMLVAERSERKLLVLANTDPLTGVKNRRFFFQTMPAAPDPADAAM 250

Query: 241 FLLDLNGFKQINDTYGHQMGDAVLKQVAYRLNNSIPSFDYRVFRMGGDEFAIILSSINST 300
            LLD++ FK IND +GH +GD+VL++VA R++ SI   D  + R GG+EF I L      
Sbjct: 251 -LLDIDHFKSINDRFGHAVGDSVLQEVARRISGSIRGGDV-LARYGGEEFIIFLPGAGVD 308

Query: 301 EQMMMQRMIKQCFDHEFELSGDLRAKLNTSVGVSTYPLDSTNLSQLIHLADKNMYEMK 358
           +  M+   I+          G LR  +  S+GV+T      +L  L   AD+ +Y  K
Sbjct: 309 KACMIGERIRDAVAINEVDCGGLRVGVTISIGVATTGDMRCDLQMLAEKADRALYRAK 366