Pairwise Alignments

Query, 547 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  229 bits (584), Expect = 3e-64
 Identities = 151/440 (34%), Positives = 242/440 (55%), Gaps = 18/440 (4%)

Query: 110 NEVAGLTQAMQRYVDYSIQTMIPLLNIEHSDQEKDERFTAQYEQATAEYRKVGNEMIKAI 169
           NE+  L Q     V Y I         EH   E    FT    QA A +  +    + A+
Sbjct: 289 NELTNLNQLKAGEVRYDIDK-------EHGHIELFLPFTIG--QADARWTLMLQLPLSAV 339

Query: 170 DVLSNRLNQVAMTTIDESEHEHDSVMSQSTFALIGILLVAALSSWLLAGIIVTPIRQLQQ 229
              S +L         + E +  + +   T A + I  +  L  WL+   I  P++Q+  
Sbjct: 340 MADSQKLQS-------DLEAQRKTDIFGMTIAGLLIAGIGLLVIWLVGHGIARPLKQMVA 392

Query: 230 TVREIAKG--NLLVKAQEEGNNEITLLARDVNATVTQLRQTVESLVRISTDVASASTELA 287
            + +IA+G  +L  +   +  +E+  +A   N  + +L+  +  +V     V+ +S   A
Sbjct: 393 MLNDIAQGEGDLTRRLTSDRADELGAIANGFNTFLIKLQGMITQVVSSVQKVSDSSEHTA 452

Query: 288 TVMTQASVNSDQEKQEVEQVASAVNQLQSTAQSVTDHAHSADGAAQQANQLASQSLRMFE 347
            +  + +    ++  E++QVA+AV+++ +TAQ V  +A  A  AA  A+Q ASQ +R+  
Sbjct: 453 DIAIRTNQGVHKQMVEIDQVATAVHEMTATAQDVARNATQAAQAASHADQAASQGMRIVR 512

Query: 348 ESHRATAKMADQLREAAQVVNQLKEQSERIGNVTEVIRSISEQTNLLALNAAIEAARAGE 407
           ++  +   +A+++ +A  VV  L + SE I  +   IR I+EQTNLLALNAAIEAARAGE
Sbjct: 513 DTSTSIGALAEEIGKAVSVVQTLAKDSENINAILTAIRGIAEQTNLLALNAAIEAARAGE 572

Query: 408 SGRGFAVVADEVRMLAARTQTSTQEIQAIIEELQNQSNTANSSMHSSLSLLEQNQSLAAK 467
            GRGFAVVADEVR LA +TQ +T+EIQ +I++LQ  +      M  S S  +++   AAK
Sbjct: 573 QGRGFAVVADEVRNLAQKTQKATEEIQTMIQQLQQGTRDVVRVMEDSQSRTDESVQHAAK 632

Query: 468 VSASLTEINHSISALGQINAQVATASEEQSQVTKDINRNLSNIYELVSQNVTGITQSAAA 527
            + +L  I  ++S +  +N Q+A+A+EEQS V +DINRN+ NI ++ ++   G  +S+AA
Sbjct: 633 AAEALETITQAVSVINDMNTQIASAAEEQSAVAEDINRNVINIGQVANEVAGGADESSAA 692

Query: 528 SHELSDLAEQQHQQLQYFRV 547
           S +L+ LAEQQ + +  F+V
Sbjct: 693 SADLTKLAEQQRRLINQFKV 712