Pairwise Alignments

Query, 547 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  242 bits (618), Expect = 2e-68
 Identities = 170/538 (31%), Positives = 283/538 (52%), Gaps = 23/538 (4%)

Query: 19  FFTLLLLIIGITF--STSSLKTAFHQVTVSTEQLITDKDNLTTLIDNTYAMRISAIYSLF 76
           F   L+L +G+      S ++ A   +T+S+   I   D  T L   T  +R+ + Y L 
Sbjct: 18  FIGALMLFLGVFALNQMSKIRGATEDITMSSVPSIRALDEFTQL---TLRLRVLS-YRLL 73

Query: 77  RPAEVTALPNVLKEKQTENLALLRSLADNPELKNEVAGLTQAMQRYVDYSIQTMIPLLNI 136
              E       L+  +  N    + +     +  ++   ++    Y DY     + LL  
Sbjct: 74  TNREPEVQQKTLEAFEVRN----QQIRTAQGIYEKLIESSEERAAYDDY-----VRLLGQ 124

Query: 137 EHSDQEKDERFTAQYEQATAEYRKVGNEMI---KAIDVLSNRL----NQVAMTTIDESEH 189
            H  +E+ +  + +  Q       + NE++   + ++ +  RL    N++A+ T  ++E 
Sbjct: 125 YHQIEERMKSLS-RANQVEELRSLLNNELLSNSEQVNAVLTRLLDINNKMALATNKDAED 183

Query: 190 EHDSVMSQSTFALIGILLVAALSSWLLAGIIVTPIRQLQQTVREIAKGNLLVKAQEEGNN 249
           +++   +     L+   L+  L +WLL   I  PI Q  +   E+A+GNL    + +G++
Sbjct: 184 QYNMAFNMVVSLLVIATLLTLLFAWLLTRSITLPIAQALEAAEEVAEGNLTRPIKVDGSD 243

Query: 250 EITLLARDVNATVTQLRQTVESLVRISTDVASASTELATVMTQASVNSDQEKQEVEQVAS 309
           E   L   +     +LR T++ +   +T +ASA+ EL  V  +++    Q+  E+EQ A+
Sbjct: 244 EAGRLLAAMAKMQDKLRDTLQRIAGSATQLASAAEELNAVTDESARGLTQQNNEIEQAAT 303

Query: 310 AVNQLQSTAQSVTDHAHSADGAAQQANQLASQSLRMFEESHRATAKMADQLREAAQVVNQ 369
           AVN++ S  + V  +A S   A++ A   A     + +E+  A  +M+  ++  A ++  
Sbjct: 304 AVNEMTSAVEEVARNAVSTSEASRNATTSAGDGRDLVQETVSAIERMSGDVQATATLIGD 363

Query: 370 LKEQSERIGNVTEVIRSISEQTNLLALNAAIEAARAGESGRGFAVVADEVRMLAARTQTS 429
           L  +S  IG V +VIR +++QTNLLALNAAIEAARAGE+GRGFAVVADEVR LA RTQ S
Sbjct: 364 LANESRDIGKVLDVIRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTQQS 423

Query: 430 TQEIQAIIEELQNQSNTANSSMHSSLSLLEQNQSLAAKVSASLTEINHSISALGQINAQV 489
           T EI+ +I  +Q  +  A  SM +S    E   ++A     SL  IN +I  + + N  +
Sbjct: 424 TSEIERMIGSIQAGTEHAVDSMRNSTERAESTLNIAKGAGMSLDTINTAIVEINERNLVI 483

Query: 490 ATASEEQSQVTKDINRNLSNIYELVSQNVTGITQSAAASHELSDLAEQQHQQLQYFRV 547
           A+A+EEQ+QV ++++RNL NI +L  Q+ TG +Q++AAS ELS LA   +  +  FR+
Sbjct: 484 ASAAEEQAQVAREVDRNLVNIRDLSVQSATGASQTSAASSELSRLAVDLNGMVGRFRL 541