Pairwise Alignments

Query, 547 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  213 bits (543), Expect = 1e-59
 Identities = 158/472 (33%), Positives = 245/472 (51%), Gaps = 32/472 (6%)

Query: 89  KEKQTENLALLRSLADNPELKNEVAGLTQAMQRYVDYSIQTMIPLLNIEHSDQEKDERFT 148
           +++ TE  A L  L D  E K   A L    + YV    Q    +       Q   E+  
Sbjct: 87  RQRITEAFATLEPLLDTAEGKAAYATLKTHREAYVAAFTQVQALI------KQGAREQGL 140

Query: 149 AQYEQATAEYRKVGNEMIKAIDVLSNRL----NQVAMTTIDESEHEHDSVMSQSTFALIG 204
           AQ +Q          + + A+  +  RL     Q A    DE+              +IG
Sbjct: 141 AQLKQQVMPAELAVFKSLDALMAMQGRLFAEREQAAQVLYDEARRN-----------MIG 189

Query: 205 ILLVAALSSWLLAGIIVTP--IRQL-------QQTVREIAKGNLLVKAQEEGNNEITLLA 255
           + L+  L+  + A IIVT   IR L        + +  IA+G+L +     GN+    + 
Sbjct: 190 LFLLC-LALVVAAAIIVTRSVIRPLGGEPDEAARVLSHIAQGDLTIVVPV-GNSAEGSVM 247

Query: 256 RDVNATVTQLRQTVESLVRISTDVASASTELATVMTQASVNSDQEKQEVEQVASAVNQLQ 315
           R+++     L Q V  +      VAS+S EL+ V +Q S +   + QE+EQ A+AVN++ 
Sbjct: 248 RNLHQMQQNLNQMVRHIATSVDGVASSSEELSAVSSQTSSSLQSQGQEIEQAATAVNEMT 307

Query: 316 STAQSVTDHAHSADGAAQQANQLASQSLRMFEESHRATAKMADQLREAAQVVNQLKEQSE 375
           +    V  +A S   A++ + Q A +     +E+  +   +A  + E ++ + QL  + +
Sbjct: 308 AAVDEVARNAVSTSEASRLSEQTAQRGRAQVQETVASINTLATGVVETSERIQQLAGRVQ 367

Query: 376 RIGNVTEVIRSISEQTNLLALNAAIEAARAGESGRGFAVVADEVRMLAARTQTSTQEIQA 435
            I +V EVIRSI++QTNLLALNAAIEAARAG++GRGFAVVADEVR LA RTQ STQEI+ 
Sbjct: 368 DISSVLEVIRSIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRALAHRTQASTQEIEQ 427

Query: 436 IIEELQNQSNTANSSMHSSLSLLEQNQSLAAKVSASLTEINHSISALGQINAQVATASEE 495
           +I  ++  +  A ++MHSS   ++   S+A +   +L EI  SIS + + N  +A+A+EE
Sbjct: 428 MIGNIRQDTEHAVAAMHSSSERVQATLSVAQRSGEALDEITRSISQINERNMMIASATEE 487

Query: 496 QSQVTKDINRNLSNIYELVSQNVTGITQSAAASHELSDLAEQQHQQLQYFRV 547
           Q+ V ++++RNL  I  L  Q + G   +  A H+L+ +A   HQ +  F+V
Sbjct: 488 QALVAREVDRNLVGIRNLSQQVLQGALHTETAGHDLAGMAGALHQTVARFKV 539