Pairwise Alignments

Query, 547 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  225 bits (574), Expect = 3e-63
 Identities = 142/366 (38%), Positives = 207/366 (56%), Gaps = 2/366 (0%)

Query: 184 IDESEHEHDSVMSQSTFALIGILLVAALSSWLLAGIIVTPIRQLQQTVREIAKG--NLLV 241
           +D+ + E  S + +++F  + I LV AL   L+A  IV P++     +  IA G  +L  
Sbjct: 179 VDDVQAEFSSQVWKASFIGLAIALVMALLVSLIARSIVRPLQAAVNAMGNIASGESDLTR 238

Query: 242 KAQEEGNNEITLLARDVNATVTQLRQTVESLVRISTDVASASTELATVMTQASVNSDQEK 301
                G +E+T L+R  N+   +LRQ V  L   +  +  +S EL +  TQA   S Q+ 
Sbjct: 239 SLDTHGQDEVTQLSRHFNSFTAKLRQVVGQLQVCANALGQSSQELGSNATQAHDRSQQQS 298

Query: 302 QEVEQVASAVNQLQSTAQSVTDHAHSADGAAQQANQLASQSLRMFEESHRATAKMADQLR 361
           Q++E VA+A+N++    Q V  +A  A    + A   A Q     + S +   +++  + 
Sbjct: 299 QQMELVATAINEVTYGVQDVAKNAEHAASEMRDAQAQAQQGQVNIDSSLQQIDQLSGTIS 358

Query: 362 EAAQVVNQLKEQSERIGNVTEVIRSISEQTNLLALNAAIEAARAGESGRGFAVVADEVRM 421
           +A +V+  L  +S +IG+V EVIRSI++QTNLLALNAAIEAARAGE GRGFAVVADEVR+
Sbjct: 359 QAVEVIRTLSAESTQIGSVLEVIRSIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRL 418

Query: 422 LAARTQTSTQEIQAIIEELQNQSNTANSSMHSSLSLLEQNQSLAAKVSASLTEINHSISA 481
           LA RTQ ST EIQ +IE LQ  S  A   +  S S  +     A +  ASLT I  S+  
Sbjct: 419 LAQRTQKSTAEIQGMIERLQGHSEAAVKVISDSHSASQMTIEQAGQAGASLTAIGESLRN 478

Query: 482 LGQINAQVATASEEQSQVTKDINRNLSNIYELVSQNVTGITQSAAASHELSDLAEQQHQQ 541
           L  +NA +A+A+ +Q+ V +DIN+N++    L         QS+ AS  L  L+EQ    
Sbjct: 479 LNGLNASIASATLQQAHVVEDINQNVTEAAGLSHSTALAAEQSSVASAHLRGLSEQLDGL 538

Query: 542 LQYFRV 547
           L+ F+V
Sbjct: 539 LRQFKV 544