Pairwise Alignments

Query, 547 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  229 bits (585), Expect = 2e-64
 Identities = 159/493 (32%), Positives = 266/493 (53%), Gaps = 29/493 (5%)

Query: 84  LPNVLKE-KQTENLALLRSLADNPELKNEVAGLTQAMQRYVD-----YSIQTMIPLLNIE 137
           LP+V+     +++L  +R+L     +  +   L Q  Q+  +     +  +T+   L + 
Sbjct: 49  LPSVMAVGDMSQDLLRIRALTLRLLVNRDPQALAQNEQKLTEIKANLHRARTLYQGLIVL 108

Query: 138 HSDQEKDERFTAQYEQATAEYRKV-----GNEMIKAIDVLSNRLNQVA------------ 180
            ++Q   +RF A+  +      +V      N++  AI V++  +NQ+A            
Sbjct: 109 PAEQVLFDRFKAEEARYLERQEQVVTLSKANQLEDAIRVVNGEMNQLADEMAATLRELVT 168

Query: 181 --MTTIDESEHEHDSVMSQSTFALIGILLVAALSSW----LLAGIIVTPIRQLQQTVREI 234
              T+ +++     SV SQS   +IG++++ AL +     LL   IV P+ Q  +  + +
Sbjct: 169 LNKTSANQAASLAQSVFSQSRIWVIGMIVLTALVTIGLAVLLTRSIVLPLAQSLKVAQGV 228

Query: 235 AKGNLLVKAQEEGNNEITLLARDVNATVTQLRQTVESLVRISTDVASASTELATVMTQAS 294
           A G+L  +    G +E   L + + +    LR T+  +   S  +ASAS EL+ V   A+
Sbjct: 229 ASGDLTGEISVCGRDEPARLQQALKSMQENLRDTIRRISESSNQLASASEELSCVTEDAT 288

Query: 295 VNSDQEKQEVEQVASAVNQLQSTAQSVTDHAHSADGAAQQANQLASQSLRMFEESHRATA 354
               Q+ QE+EQ A+AVNQ+ +  + V  +A +   A+++++++A +     +++  +  
Sbjct: 289 RGLHQQSQEIEQAATAVNQMTAAVEEVASNAVATSQASRESDRIAQRGREQVQQTVVSIE 348

Query: 355 KMADQLREAAQVVNQLKEQSERIGNVTEVIRSISEQTNLLALNAAIEAARAGESGRGFAV 414
            +A  + +    V  L ++   I  V +VIRSI+EQTNLLALNAAIEAARAG++GRGFAV
Sbjct: 349 ALATDVTDNVTQVEDLAQKVYGISKVLDVIRSIAEQTNLLALNAAIEAARAGDAGRGFAV 408

Query: 415 VADEVRMLAARTQTSTQEIQAIIEELQNQSNTANSSMHSSLSLLEQNQSLAAKVSASLTE 474
           VADEVR LA RTQ STQEI+ +I  +Q  ++ A SSM  S +       +A     +L E
Sbjct: 409 VADEVRALAHRTQQSTQEIEQMISGIQQGTDQAVSSMQQSNTRARSTLDIAKSAGTALEE 468

Query: 475 INHSISALGQINAQVATASEEQSQVTKDINRNLSNIYELVSQNVTGITQSAAASHELSDL 534
           I  + + + + N  +A+ASE+Q+ V ++++RNL NI +L  Q  TG  Q++AASH+LS L
Sbjct: 469 IASAFTLINERNLVIASASEQQAAVAREVDRNLMNIRDLAHQTSTGANQTSAASHDLSRL 528

Query: 535 AEQQHQQLQYFRV 547
           A   +  +  F V
Sbjct: 529 AVDLNTLVARFSV 541