Pairwise Alignments

Query, 547 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 561 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  481 bits (1237), Expect = e-140
 Identities = 272/546 (49%), Positives = 377/546 (69%), Gaps = 11/546 (2%)

Query: 5   LSGLSIKLQVVVPVFFTLLLLIIGITFSTSSLKTAFHQVTVSTEQLITDKDNLTTLIDNT 64
           L  LSI+LQV++PV FT++ L+I +  +  +L      +  +T  L+  KD +  + D  
Sbjct: 24  LKNLSIRLQVLLPVLFTMIALVIALWITKVNLTHEQQAIADNTHALVRYKDTIAQIDDTI 83

Query: 65  YAMRISAIYSLFRPAEVTALPNVLKEKQTENLALLRSLADNPELKNEVAGLTQAMQRYVD 124
           Y +RISA+Y+++           L+E  TE  + L S+  + +   +V  + Q+++ YV 
Sbjct: 84  YPLRISAVYAIYDAERRNNFIAELREGLTEVQSALSSIEQDAQFSRDVPVVKQSIEIYVA 143

Query: 125 YSIQTMIPLLNIEHSDQEKDERFTAQYEQATA---EYRKVGNEMIKAIDVLSNRLNQVAM 181
            S Q M+ L N       + ++  A  E+A      +R+ GN MI AI+ LS ++N  A 
Sbjct: 144 ES-QKMVALFN-------RLDQGLATREEANVFIQSFRETGNRMISAINDLSQKVNHYAT 195

Query: 182 TTIDESEHEHDSVMSQSTFALIGILLVAALSSWLLAGIIVTPIRQLQQTVREIAKGNLLV 241
           T++++S   +  VM  +   ++ +L+++ L++WLL+G IV PI  LQ  +R++A+G+L V
Sbjct: 196 TSMEQSAQSNAVVMRNAMITVLSVLMLSVLAAWLLSGQIVAPINSLQSVMRKLAQGDLSV 255

Query: 242 KAQEEGNNEITLLARDVNATVTQLRQTVESLVRISTDVASASTELATVMTQASVNSDQEK 301
           KA  +G NEI  L++DVN TVTQL  TVE L RIS +VASASTELA VMTQA  N+  E 
Sbjct: 256 KADADGENEIAKLSQDVNTTVTQLYTTVEQLTRISEEVASASTELAAVMTQAESNAQMEL 315

Query: 302 QEVEQVASAVNQLQSTAQSVTDHAHSADGAAQQANQLASQSLRMFEESHRATAKMADQLR 361
            E+EQVASAVN+L STA +V+D+A SAD  A++A++LA   L +F+ES +A+ +MA  L 
Sbjct: 316 MEIEQVASAVNELASTADNVSDNASSADATAREADELAKSGLAIFKESSQASEQMALALN 375

Query: 362 EAAQVVNQLKEQSERIGNVTEVIRSISEQTNLLALNAAIEAARAGESGRGFAVVADEVRM 421
           +AA+VV +LKEQSE+I NV EVIR +S+QTNLLALNAAIEAARAGESGRGFAVVADEVRM
Sbjct: 376 DAARVVLRLKEQSEQISNVIEVIRGVSDQTNLLALNAAIEAARAGESGRGFAVVADEVRM 435

Query: 422 LAARTQTSTQEIQAIIEELQNQSNTANSSMHSSLSLLEQNQSLAAKVSASLTEINHSISA 481
           LAARTQ ST+EIQAIIEELQ QS  AN SM +SL +L QN++L AK + +L  I  S+S 
Sbjct: 436 LAARTQASTKEIQAIIEELQTQSTMANDSMQTSLDMLTQNKALTAKANDALIGITESVSD 495

Query: 482 LGQINAQVATASEEQSQVTKDINRNLSNIYELVSQNVTGITQSAAASHELSDLAEQQHQQ 541
           +   NAQVATA+E+QS VT+DINRN+SN+  LV QNVTGI+QSA+AS+ELS LAE+Q  Q
Sbjct: 496 INDSNAQVATAAEQQSHVTQDINRNVSNMSTLVHQNVTGISQSASASNELSHLAEKQKAQ 555

Query: 542 LQYFRV 547
           L +F++
Sbjct: 556 LSFFKL 561