Pairwise Alignments

Query, 547 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 548 a.a., methyl-accepting chemotaxis protein HlyB from Vibrio cholerae E7946 ATCC 55056

 Score =  211 bits (537), Expect = 6e-59
 Identities = 151/490 (30%), Positives = 250/490 (51%), Gaps = 35/490 (7%)

Query: 67  MRISAIYSLFRPAEVTALPNVLK---EKQTENLALLRSLAD-------NPELKNEVAGLT 116
           MR+     L +   +     VLK   E +TE++  +R           NPELK +   L 
Sbjct: 65  MRVGIDMMLLQETALKDAKGVLKRVEEARTEDIPEMRQAMQVAVDSQVNPELKEQARKLQ 124

Query: 117 QAMQRYVDYSIQTMIPLLNIEHSDQEKDER-FTAQYEQATAEYRKVGNEMIKAIDVLSNR 175
              ++ V   ++ M+      ++D    +  +  +Y     E RK              +
Sbjct: 125 ARFEQMVREELEPMLQAF--ANNDMTTAQNIYRDKYAPTYGEMRK--------------Q 168

Query: 176 LNQVAMTTIDESEHE-HDSVMSQSTFALIGILLVAA--LSSWLLAGIIVTPIRQLQQTVR 232
            NQ+  T + ++E + H SV S        ++++AA  + S++ + +I+T +R     ++
Sbjct: 169 ANQILDTLLQQAEQQNHASVESFEAGRTKQMVIIAAGLIISFITSLVIITNLRSRVAYLK 228

Query: 233 E-----IAKGNLLVKAQEEGNNEITLLARDVNATVTQLRQTVESLVRISTDVASASTELA 287
           +      A  +L  + + +GN+E+  + +  NA + ++  ++E +   S ++A+ ++ ++
Sbjct: 229 DRMSSAAANLSLRTRLELDGNDELCDIGKSFNAFIDKVHHSIEEVAENSKELATMASSVS 288

Query: 288 TVMTQASVNSDQEKQEVEQVASAVNQLQSTAQSVTDHAHSADGAAQQANQLASQSLRMFE 347
                   N   ++    QVA+A+++L +T   +  +A  A   A+QA   + +  ++  
Sbjct: 289 QRAHMTQSNCASQRDRTVQVATAIHELGATVSEIASNAAMAADVAKQATLHSGEGKKVVG 348

Query: 348 ESHRATAKMADQLREAAQVVNQLKEQSERIGNVTEVIRSISEQTNLLALNAAIEAARAGE 407
           E       + ++L  A QVV+ L  Q   I +  + IRSISEQTNLLALNAAIEAARAGE
Sbjct: 349 EVQNRIQTLVNELDNATQVVSSLATQINGISSTLDTIRSISEQTNLLALNAAIEAARAGE 408

Query: 408 SGRGFAVVADEVRMLAARTQTSTQEIQAIIEELQNQSNTANSSMHSSLSLLEQNQSLAAK 467
            GRGFAVVADEVR LA+R+  ST+EIQ +I  LQ +S  A  +M    S  +     +AK
Sbjct: 409 QGRGFAVVADEVRTLASRSAASTEEIQQVINRLQTESTRAVEAMEKGRSQSDVVVEFSAK 468

Query: 468 VSASLTEINHSISALGQINAQVATASEEQSQVTKDINRNLSNIYELVSQNVTGITQSAAA 527
            + SLTEIN  I  +   N QVATA+EEQS V +DINRN+ +I +L ++      + + A
Sbjct: 469 ANQSLTEINSQIDQINDQNIQVATATEEQSTVVEDINRNVEDINQLTTETSHVADELSRA 528

Query: 528 SHELSDLAEQ 537
           S  L  L+ Q
Sbjct: 529 SASLQRLSSQ 538