Pairwise Alignments

Query, 547 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  231 bits (588), Expect = 8e-65
 Identities = 167/550 (30%), Positives = 279/550 (50%), Gaps = 26/550 (4%)

Query: 7   GLSIKLQVVVPVFFTLLLLIIGITF------STSSLKTAFHQVTVSTEQLITDKDNLTTL 60
           GL +KL VV+ V   L L   G+T       S  SL T   Q T+   +++ +  +  + 
Sbjct: 54  GLRLKLIVVLIVVSILFLGFKGLTGMQSASDSIESLYTKGMQHTIRAGRILDELGSARSQ 113

Query: 61  IDNTYAMRISAIYSLFRPAEVT--------ALPNVLKEKQTENLALLRSLADNPELKNEV 112
           +   +    S+ Y+L     +T        +L N+ +    E LA +  + +   ++   
Sbjct: 114 LLLAFQHDPSSKYALMHDHPITMHVEGIQTSLTNLHRIVDNEILATVLDVQEKAVIQTLK 173

Query: 113 AGLTQAMQRYVDYSIQTMIPLLNIEHSDQEKDERFTAQYEQATAEYRKVGNEMIKAIDVL 172
             L Q  ++  + ++Q            Q K E++ A           + NE+ KA +  
Sbjct: 174 EKLDQVTRQGFEPALQ------------QLKAEKYDAANLILLQVINPLYNEIKKAAEAF 221

Query: 173 SNRLNQVAMTTIDESEHEHDSVMSQSTFALIGILLVAALSSWLLAGIIVTPIRQLQQTVR 232
            +   Q        S+HE +  +   +      L+V    + L+A  +   +  L  +  
Sbjct: 222 LDIQTQEGKNNFSASQHEINQFIWMVSLLGAFALIVTTSLALLIAKRVNNAVHHLASSAT 281

Query: 233 EIAKGNLLVKAQEEGNNEITLLARDVNATVTQLRQTVESLVRISTDVASASTELATVMTQ 292
            IA G+L  +    GN+E + +A+ VN  VT  ++ + S     + +A+A+ E A V  Q
Sbjct: 282 HIAAGDLTQRIPVTGNDEFSDIAKYVNRIVTSFQEVISSNRHSVSALATAAEENAAVAMQ 341

Query: 293 ASVNSDQEKQEVEQVASAVNQLQSTAQSVTDHAHSADGAAQQANQLASQSLRMFEESHRA 352
              N  +++ + +Q+A+A++Q  +T   V   A  A  A+++A Q A Q  ++ EE+   
Sbjct: 342 TKQNIVEQQSQTQQIAAAIHQFTATVHEVAQSAGLAAEASEEAEQAAMQGRKVVEENIAM 401

Query: 353 TAKMADQLREAAQVVNQLKEQSERIGNVTEVIRSISEQTNLLALNAAIEAARAGESGRGF 412
              +++ L++    +  L + SE IG+V +VI+SISEQTNLLALNAAIEAARAGE GRGF
Sbjct: 402 IEGLSNDLQKMLAAMQLLAKDSEDIGSVVDVIQSISEQTNLLALNAAIEAARAGEQGRGF 461

Query: 413 AVVADEVRMLAARTQTSTQEIQAIIEELQNQSNTANSSMHSSLSLLEQNQSLAAKVSASL 472
           AVVADEVR LA+RTQ ST++I   ++ LQ  S  + + +   +S   +    A     +L
Sbjct: 462 AVVADEVRTLASRTQESTKQILQTVQRLQQSSRDSANLIEQGVSGASKAVEKARLAGTAL 521

Query: 473 TEINHSISALGQINAQVATASEEQSQVTKDINRNLSNIYELVSQNVTGITQSAAASHELS 532
           ++I  ++  +  +N Q+ATASEEQS VT++IN+N+  I E+ +Q   G  QS+ A+ EL+
Sbjct: 522 SQITANVDRISTMNTQIATASEEQSAVTEEINKNIITISEISNQTALGAQQSSEATLELA 581

Query: 533 DLAEQQHQQL 542
            LAE   Q++
Sbjct: 582 RLAESMQQEV 591