Pairwise Alignments

Query, 547 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  213 bits (541), Expect = 2e-59
 Identities = 131/355 (36%), Positives = 201/355 (56%), Gaps = 4/355 (1%)

Query: 196 SQSTFALIGILLVAALSSWLLAGIIVTPIRQLQQTVREIAKGNL--LVKAQEEGNNEITL 253
           S S  + I IL +  L +WLL  +I  P+  + +    IAKG+L   +     GN+E+  
Sbjct: 189 STSVASNIAILAIMVLMTWLLTRLICGPLAIVMKQSNAIAKGDLSQTMDRSSIGNDELGT 248

Query: 254 LARDVNATVTQLRQTVESLVRISTDVASASTELATVMTQASVNSDQEKQEVEQVASAVNQ 313
           LA         LRQ ++ ++   T ++SA  E+  +  Q++    +++ ++ QVA+A+ Q
Sbjct: 249 LANASEQMQQNLRQLIDEIISAVTQLSSAVEEMTQISNQSADGMKEQQYQITQVATAMAQ 308

Query: 314 LQSTAQSVTDHAHSADGAAQQANQLASQSLRMFEESHRATAKMADQLREAAQVVNQLKEQ 373
           +++    V  +   +   A  AN  + +  R      R+  ++AD + EA Q V++L++Q
Sbjct: 309 MKAAVADVARNTEDSASQAMAANHKSQEGARENASMVRSIQQVADIIGEAGQTVSELEQQ 368

Query: 374 SERIGNVTEVIRSISEQTNLLALNAAIEAARAGESGRGFAVVADEVRMLAARTQTSTQEI 433
           S +I  V +VIRSI++QTNLLALNAAIEAARAGESGRGFAVVADEVR LA RTQ ST EI
Sbjct: 369 SSQINVVVDVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAGRTQDSTGEI 428

Query: 434 QAIIEELQNQSNTANSSMHSSLSLLEQNQSLAAKVSASLTEINHSISALGQINAQVATAS 493
             IIE+LQ  +  A  +   S S +++         + +  I  SI+ +  +  Q+A+A 
Sbjct: 429 TTIIEKLQVMAKQAKDATERSRSSIDKCVEQGNHSQSLMISIEESIANIADVGTQIASAC 488

Query: 494 EEQSQVTKDINRNLSNIYELVSQNVT-GITQSAAASHELSDLAEQQHQQLQYFRV 547
            EQ  V  +++RN+ NI+ L SQ V  G  Q+A A  EL+ LA      L+ F++
Sbjct: 489 SEQDSVADELSRNVENIH-LASQEVAQGSQQTAQACRELTQLAVSLQDTLRRFKI 542