Pairwise Alignments

Query, 547 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  228 bits (582), Expect = 3e-64
 Identities = 163/494 (32%), Positives = 263/494 (53%), Gaps = 37/494 (7%)

Query: 80  EVTALPNVLKEKQTENLALLRSLADNPELKNEVAGLTQAMQRYVDYSIQTMIPLLNIEHS 139
           E+TAL N+     +  L L R     P  + +   +       +D + Q  +P++     
Sbjct: 57  ELTAL-NLRMRTLSYRLLLNRE----PATQRDTLDMLDQRNSQIDRARQAYLPMIVAADE 111

Query: 140 DQEKDERFTAQYEQATAEYRKVGNEM--------------IKAIDVLSN--RLNQVAMTT 183
               D     QY Q   +YR++ + M              +   D+L+N  ++N+V  T 
Sbjct: 112 QAAFD-----QYGQLLNQYRQLESRMRTLSQADRLDELRDLLNRDLLANSEQINKVMDTL 166

Query: 184 I----DESEHEHDSVMSQ--STFALIGILLVAAL-----SSWLLAGIIVTPIRQLQQTVR 232
           +    D++   ++   +Q    FAL+  LLVAA       ++LL   IV PI +  +   
Sbjct: 167 VRINTDQTRATNEKAANQYAGAFALVIGLLVAATVLTFACAFLLTRSIVKPIEEALKCAE 226

Query: 233 EIAKGNLLVKAQEEGNNEITLLARDVNATVTQLRQTVESLVRISTDVASASTELATVMTQ 292
           ++A G+L    + EG +E   L R +     +LR T++ +   +T +ASA+ EL  V  +
Sbjct: 227 QVADGDLTHVIRAEGTDEAARLLRAMARMQDKLRDTLQQIAGSATQLASAAEELNAVTDE 286

Query: 293 ASVNSDQEKQEVEQVASAVNQLQSTAQSVTDHAHSADGAAQQANQLASQSLRMFEESHRA 352
           ++    Q+  E+EQ A+AV ++ S  + V  +A S   A+ +A++       +  E+  A
Sbjct: 287 SARGLQQQNNEIEQAATAVTEMTSAVEEVARNAVSTSEASSEASRSTGDGRDLVMETVGA 346

Query: 353 TAKMADQLREAAQVVNQLKEQSERIGNVTEVIRSISEQTNLLALNAAIEAARAGESGRGF 412
             +M+  ++  A+++  L EQS  IG V +VIR +++QTNLLALNAAIEAARAGE+GRGF
Sbjct: 347 IERMSGDVQATAKLITHLAEQSRDIGKVLDVIRGLADQTNLLALNAAIEAARAGEAGRGF 406

Query: 413 AVVADEVRMLAARTQTSTQEIQAIIEELQNQSNTANSSMHSSLSLLEQNQSLAAKVSASL 472
           AVVADEVR LA RTQ ST EI+ +I  +Q  +  A  SM +S    E   ++A     +L
Sbjct: 407 AVVADEVRALAHRTQQSTSEIERMIGSIQGGTEEAVESMRTSTERAESTLNIARGAGMAL 466

Query: 473 TEINHSISALGQINAQVATASEEQSQVTKDINRNLSNIYELVSQNVTGITQSAAASHELS 532
             I  +++ + + N  +A+A+EEQ+QV ++++RNL NI +L  Q+ TG  Q++AAS ELS
Sbjct: 467 DTIAGAVAQINERNLVIASAAEEQAQVAREVDRNLVNINDLSVQSATGAHQTSAASAELS 526

Query: 533 DLAEQQHQQLQYFR 546
            LA   +  +  FR
Sbjct: 527 RLAVDLNGLVARFR 540