Pairwise Alignments

Query, 547 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 553 a.a., hypothetical protein from Pseudomonas lactucae CFBP13502

 Score =  209 bits (531), Expect = 3e-58
 Identities = 152/477 (31%), Positives = 249/477 (52%), Gaps = 24/477 (5%)

Query: 80  EVTALPNVLKEKQTENLALLRSLADNPELKNEVAGLTQAMQRYVDYSIQTMIPLLNIEHS 139
           +  A  +  +++ T+  A L  L D  E K   A L    + YV    Q    +      
Sbjct: 92  QAQAAISTTRQRITDAFAALEPLLDTAEGKAAYARLKTHREAYVAAFTQVQALIR----- 146

Query: 140 DQEKDERFTAQYEQATAEYRKVGNEMIKAIDVLSNRLNQVAMTTIDESEHEHDSVMSQST 199
            Q   E+  AQ +Q   +      ++ K++D L     +V      E +    ++  ++ 
Sbjct: 147 -QGAREQGLAQLKQ---QVMPAELDVFKSLDALMAMQGRV----FAERQQAAQTLYDEAR 198

Query: 200 FALIGILLVAALSSWLLAGIIVT-----PI----RQLQQTVREIAKGNLLVKAQEEGNNE 250
             ++G+ L+  L+  + A +IVT     P+     +  + +  IA+G+L ++    GN+ 
Sbjct: 199 RTMLGLFLLC-LALVVTAAVIVTRSVLRPLGGEPSEAARVLNHIAEGDLTIQVPV-GNSA 256

Query: 251 ITLLARDVNATVTQLRQTVESLVRISTDVASASTELATVMTQASVNSDQEKQEVEQVASA 310
              + R+++     L Q V  +      VAS+S EL+ V  Q S +   + QE+EQ A+A
Sbjct: 257 EGSVMRNLHRMQQSLNQMVRHIAASVDGVASSSEELSAVSGQTSSSLQAQGQEIEQAATA 316

Query: 311 VNQLQSTAQSVTDHAHSADGAAQQANQLASQSLRMFEESHRATAKMADQLREAAQVVNQL 370
           VNQ+ +    V  +A S   A++ + Q A +     +E+  +   +A  + E ++ + QL
Sbjct: 317 VNQMTAAVDEVARNAVSTSEASRLSEQTAQRGRAQVQETVASINTLATGVVETSERIQQL 376

Query: 371 KEQSERIGNVTEVIRSISEQTNLLALNAAIEAARAGESGRGFAVVADEVRMLAARTQTST 430
             + + I  V EVIRSI++QTNLLALNAAIEAARAG++GRGFAVVADEVR LA RTQTST
Sbjct: 377 AGRVQDISGVLEVIRSIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRALAHRTQTST 436

Query: 431 QEIQAIIEELQNQSNTANSSMHSSLSLLEQNQSLAAKVSASLTEINHSISALGQINAQVA 490
           QEI+ +I  ++  +    ++MHSS   ++    +A +   +L EI  SIS + + N  +A
Sbjct: 437 QEIEQMIGNIRQDTEHVVAAMHSSSERVQATLGVAQRSGEALEEITRSISQINERNMMIA 496

Query: 491 TASEEQSQVTKDINRNLSNIYELVSQNVTGITQSAAASHELSDLAEQQHQQLQYFRV 547
           +A+EEQ+ V ++++RNL  I  L  Q + G   +  A  +L+ +A   HQ +  FRV
Sbjct: 497 SATEEQALVAREVDRNLVGIRNLSQQVLQGALHTETAGQDLAGMAGVLHQMVGRFRV 553