Pairwise Alignments

Query, 547 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., hypothetical protein from Pseudomonas lactucae CFBP13502

 Score =  228 bits (580), Expect = 6e-64
 Identities = 146/404 (36%), Positives = 223/404 (55%), Gaps = 4/404 (0%)

Query: 136 IEHSDQEKDERFTAQYEQATAEYRKVGNEMIKAIDVLSNRLNQVAMTTIDESEHEHDSVM 195
           I  SD+      + Q EQA  +     NE+ +    L   + +     I E     D + 
Sbjct: 125 ISSSDRIMSMLESGQLEQARTQLNTTNNELFRQARELIRVMIESNNRQIKEGAIAADELR 184

Query: 196 SQS-TFALIGILL---VAALSSWLLAGIIVTPIRQLQQTVREIAKGNLLVKAQEEGNNEI 251
           + + T+ + GI+L   +A +   L+  +I  PI Q  Q+ + IAKG+L      E  +E 
Sbjct: 185 NSALTWMISGIVLAFIIAIIIGVLITRLITRPIAQAVQSAQRIAKGDLTQAIITERTDEA 244

Query: 252 TLLARDVNATVTQLRQTVESLVRISTDVASASTELATVMTQASVNSDQEKQEVEQVASAV 311
             L   ++   + L+ T+  +   S  +ASA+ EL+ V  ++S    ++  E++Q A+AV
Sbjct: 245 GQLLMALSDMQSGLKSTLMEIANASDQLASAAEELSAVTDESSRGLTRQNDEIQQAATAV 304

Query: 312 NQLQSTAQSVTDHAHSADGAAQQANQLASQSLRMFEESHRATAKMADQLREAAQVVNQLK 371
           NQ+ +    V  +A S   A++QA   A        ++      M  ++ E+ Q V  L 
Sbjct: 305 NQMTAAVDEVASNAVSTSEASRQATTEAEDGREQVAQAVSGMRSMVVEINESTQSVESLA 364

Query: 372 EQSERIGNVTEVIRSISEQTNLLALNAAIEAARAGESGRGFAVVADEVRMLAARTQTSTQ 431
            Q   IGNV +VIR+I++QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQ ST 
Sbjct: 365 NQVREIGNVIDVIRAIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAHRTQVSTV 424

Query: 432 EIQAIIEELQNQSNTANSSMHSSLSLLEQNQSLAAKVSASLTEINHSISALGQINAQVAT 491
           +I+ +I  +Q  ++ A ++M+ SLS     QSLA     +L  I  S++ + + N  +A+
Sbjct: 425 DIEKMIGAVQVGADGAVAAMNKSLSWANNTQSLAQNAGEALQRITASVAKINERNLVIAS 484

Query: 492 ASEEQSQVTKDINRNLSNIYELVSQNVTGITQSAAASHELSDLA 535
           ASEEQ+QV ++++RNL NI +L +Q   G  Q+ A+S +LS LA
Sbjct: 485 ASEEQAQVAREVDRNLLNIQDLSTQTAAGAHQTNASSQDLSRLA 528