Pairwise Alignments

Query, 713 a.a., ligand-gated channel from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., Outer membrane vitamin B12 receptor BtuB from Variovorax sp. SCN45

 Score = 89.4 bits (220), Expect = 5e-22
 Identities = 141/590 (23%), Positives = 241/590 (40%), Gaps = 98/590 (16%)

Query: 17  GFAHAETEPSHYEEVVVTANRIEQPLSEVAGSVAVLEGETLEKQGKTELYDALNQEPGVS 76
           G AHA+  P+   E VVTANR  Q LS++ G V++++ +T+E+ G T + D L + PG+ 
Sbjct: 32  GLAHAQEAPT-LGETVVTANRTPQALSDLVGDVSIIDRQTIERSGATGVADVLARLPGIE 90

Query: 77  V--TGGAGRPQNITIRGMTGNRIAIVRDGIQ-SADGYGAADINDKYGRNTFSLSNVKQIQ 133
           +  +GG G   ++ IRG      A+  DG++  +   G A      G     LS + +I+
Sbjct: 91  ISRSGGVGNTTSLYIRGAETRFTAVYLDGVRIDSQSTGGA------GWEGIPLSQIDRIE 144

Query: 134 VVKGASSTLYGSGAIGGVVIIESKAPEDYLYHRDYYVDAALTYSGISNRYQGNHALAMRH 193
           V++G ++ +YGS AIGGV+ + ++  E          +    Y+GI     G++ L    
Sbjct: 145 VLRGPAAAVYGSDAIGGVIQLFTRRGE----------EGVSPYAGIG---FGSYGLRKIE 191

Query: 194 G--DGEALLTIDYWQG---EETRNFN-QDLYNREV--DGYNLGFSHHYWLNDALRLKTHL 245
           G   G++ L +DY  G   EE++ +N Q +  R V  DG+                    
Sbjct: 192 GGVSGKSGL-LDYSFGVAHEESKGYNIQPVDKRNVVKDGFT------------------- 231

Query: 246 EYFDDYAKRREGTSSIQKDDKWDLVSFYEYQRSQTRLAS-VGADYTANLSWMDTLEGKFY 304
                 +  R+G +S   + K       + +   T LAS + A Y A +S+   L   F 
Sbjct: 232 ------SPDRDGYNSTSGNLKLGFQITPDQRIDATLLASDIQAGYDATVSYKTKLPFLFA 285

Query: 305 WRSTENITQTNRLMANDRSGAGILSYRRELRDEGFNDEALGATLNAQKEWQQGEWLHQFA 364
              + N  +T  L  + +    + S R ++ D     +   +    +   +   + ++F 
Sbjct: 286 NDISSNTLRTAGLTWSAKWN-DVYSTRVQITDSQSVYKTQPSFYRTETHLRGYLFQNEFR 344

Query: 365 YGMS-VDGHDYQRPKSIRRMESSGDDLQADEPFAPAREYRFGVYGQDNLLLGDWTLAAGL 423
           +G   V     +R  ++    ++   L + +    A    +G       + G  +L   L
Sbjct: 345 FGPHLVTAALERREDALDNAPTTSSKLLSRDRAQDAVSLGYG------FVQGPHSLQLHL 398

Query: 424 RFDAQKLSPKNTDRIHGYKVVTMGSSEWSPSASISYQWHPEWNTYLSYNHGFRAPSYDKA 483
           R D         D   G K  T GS      A+  Y   P      S    FR P+  + 
Sbjct: 399 RHD--------RDSEFGGK--TTGS------AAYGYAITPSLRFTASAGTAFRVPTLYQR 442

Query: 484 YGASDHSFVPLTPFIIKPNNKLRAETSDSFELGSKYDNGQTQFYVAVFYSIFDNFIDVKQ 543
           +  S++    L P           E+S + ELG +Y  G +   + V+ +   N I    
Sbjct: 443 F--SEYGLASLQP-----------ESSRNVELGLQYTEGASHAGIVVYKNQVRNLITFD- 488

Query: 544 VGYDNATGSVIQQYQNIAGVKTYGAEMSVMHRLDDRWSVENKLGYVDGKD 593
            G      S    Y N A  +  G  +S  HR+ D  ++   L + D +D
Sbjct: 489 -GTAKGCASSFGCYGNTARARYQGVTLSGGHRIGD-VTLRTSLDFQDPRD 536