Pairwise Alignments

Query, 713 a.a., ligand-gated channel from Vibrio cholerae E7946 ATCC 55056

Subject, 698 a.a., TonB-dependent hemoglobin/transferrin/lactoferrin family receptor from Vibrio cholerae E7946 ATCC 55056

 Score =  215 bits (547), Expect = 7e-60
 Identities = 192/726 (26%), Positives = 319/726 (43%), Gaps = 49/726 (6%)

Query: 2   KLSPVSAAVLSVLAAGFAHAETEPSHYEEVVVTANRIEQPLSEVAGSVAVLEGETLEKQG 61
           K S +S+A++  L    A+A+   S ++EVVV+  R+   +++ A SVAV+    +E+Q 
Sbjct: 8   KKSLLSSAIMLALVPS-AYADDYAS-FDEVVVSTTRLNTQITDTAASVAVINASDIEQQM 65

Query: 62  KTELYDALNQEPGVSVTGGAGRP-QNITIRGMTGNRIAIVRDGIQSADGYGAADINDKYG 120
             ++       PGV++T  + +  Q I IRG+ GNRI ++ DG+   + + + +      
Sbjct: 66  AEDIEGLFKYTPGVTLTTNSRQGVQGINIRGIEGNRIKVIVDGVAQPNQFDSGNSFLNSS 125

Query: 121 RNTFSLSNVKQIQVVKGASSTLYGSGAIGGVVIIESKAPEDYLYHRDYYVDAALTYSGIS 180
           R       VK +++VKGA+S+L GS AIGG+V  E+K P D L  R+    A L YS   
Sbjct: 126 RVDIDTDMVKSVEIVKGAASSLQGSDAIGGIVAFETKDPADILKGRNMGGYAKLNYSSSD 185

Query: 181 NRYQGNHALAMRHGDGEALLTIDYWQGEETRNFNQDLYNREVDGYNLGFSHHYWLNDALR 240
             +  + ALA + GD E+L+      G+E +NF      ++ +  NL     Y LN    
Sbjct: 186 KTFSESIALANKSGDLESLVAYTRRDGQEIQNFGSP-DQQDNNANNLLVKLQYQLNP--- 241

Query: 241 LKTHLEYFDDYAKRREGTSSIQKDDKWDLVSFYEYQRSQTRLASVGADYTANLSWMDTLE 300
            K  LE+  +Y + +    +++     +     E  + Q  +  +   + A  S  D + 
Sbjct: 242 -KHRLEFSGNYIRNKNDLENLEFSGYKNASGTDETTQYQLGIKHI---WDAEFSLADRIT 297

Query: 301 GKFYWRSTENITQTNRLMANDRSGAGILSYRRELRDEGFNDEALGATLNAQKEWQQGEWL 360
            +F     E    T+R     +S   I     + +D  ++D+         K +      
Sbjct: 298 WQFDVVGKEETGITDR---TSKSNGNI-----QKKDYLYSDKGFSFDSQLDKSFMVSNTE 349

Query: 361 HQFAYGMSVDGHDYQRPKSIRRMESSGDDLQADEPFAPAREYRFGVYGQDNLLLGDWTLA 420
           H   YG S+   D +     +   S G +         A E R+G + QD +   +  + 
Sbjct: 350 HYIVYGFSLSDKDIENTN--QEFNSIGKN-NVIFYIPNASEKRYGFFIQDEIAFDNLIVT 406

Query: 421 AGLRFDAQKLSPKNT------DRIHGYKVVTMGSSEWSPSASISYQWHPEWNTYLSYNHG 474
            G+RFD+ +  P +T      +    YK      S  +      Y+ + E   +   + G
Sbjct: 407 PGIRFDSFETKPGDTSANPSLNDASEYK--KYSDSALTARLGTVYKLNQENRLFAQISQG 464

Query: 475 FRAPSYDKAYGASDHSF-VPLTPFIIKPNNKLRAETSDSFELGSKYDNGQTQFYVAVFYS 533
           FRAP + + Y    +SF  P   ++ KPN  L AE S S+ELG +Y+       +++FYS
Sbjct: 465 FRAPDFQELY----YSFGNPAHGYVFKPNPNLEAEDSVSYELGWRYNADSVSNELSIFYS 520

Query: 534 IFDNFIDVKQVGYDNATGSVIQQYQNIAGVKTYGAEMSVMHRLDD-----RWSVENKLGY 588
            +DNFID + V     T   + Q  NI      G E+S     D       +S      Y
Sbjct: 521 DYDNFIDSQIVSGSFKTRDAVHQSINIDKATIKGIELSNQFFWDRFMPIVGFSSRIAAAY 580

Query: 589 VDGKDGENQYVRTLTPLEGSVQLNYQRERWDAYSRLNWASAMSRVPTCTTEQGK-ETECA 647
            +GKDG  + + +++P      +NY  E        NW +A++   T   +  +   +  
Sbjct: 581 TEGKDGNGKPLNSVSPWNAVTGINYDSEN-------NWGTAVNLTYTAKKKASEINGDYQ 633

Query: 648 TTTGWVSWDIGLNYQWNAQLSASFNVVNLLDREYTRYQDVAGVTPSDTLYSTEPGRYFTV 707
             +     D+   Y+    L+    V NL D EY  + DV G+ PS+    T+  R F +
Sbjct: 634 PISSATVIDVTAYYKPIKDLTLRAGVFNLTDEEYYNWNDVRGL-PSEDKDKTQAKRNFGI 692

Query: 708 HAKYVF 713
            AKY F
Sbjct: 693 TAKYEF 698