Pairwise Alignments

Query, 713 a.a., ligand-gated channel from Vibrio cholerae E7946 ATCC 55056

Subject, 651 a.a., Outer membrane vitamin B12 receptor BtuB from Sphingobium sp. HT1-2

 Score = 73.2 bits (178), Expect = 4e-17
 Identities = 44/135 (32%), Positives = 74/135 (54%), Gaps = 5/135 (3%)

Query: 31  VVVTANRIEQPLSEVAGSVAVLEGETLEKQGKTELYDALNQEPGVSVT--GGAGRPQNIT 88
           ++VTA R+  P+ +V  SV VL+   +++     + + L + PGVS++  GG G   ++ 
Sbjct: 38  ILVTATRLATPVDQVPASVTVLDKAAIDRAQDLGVTELLLRTPGVSISRNGGYGTATSLR 97

Query: 89  IRGMTGNRIAIVRDGIQSADGYGAADINDKYGRNTFSLSNVKQIQVVKGASSTLYGSGAI 148
           IRG   ++  +V DG++  D   A      Y      + +  +I+V++G  STL+GS AI
Sbjct: 98  IRGAESDQTVVVIDGVKLNDPSSAGG---GYNFANLLVGDASRIEVLRGPQSTLWGSQAI 154

Query: 149 GGVVIIESKAPEDYL 163
           GGVV + +  PE  L
Sbjct: 155 GGVVNVVTAMPEKAL 169