Pairwise Alignments

Query, 713 a.a., ligand-gated channel from Vibrio cholerae E7946 ATCC 55056

Subject, 862 a.a., putative outer membrane heme receptor from Pseudomonas putida KT2440

 Score =  142 bits (359), Expect = 5e-38
 Identities = 176/750 (23%), Positives = 286/750 (38%), Gaps = 95/750 (12%)

Query: 29  EEVVVTANRIEQPLSEVAGSVAVLEGETLEKQGKTELYDALNQEPGVSVTGGAGRP--QN 86
           ++V V+A R  Q +S+V  +V+V   E L++Q    + D +  EPGVSV+G   R     
Sbjct: 133 QQVTVSATRSAQDVSQVPSTVSVQTREQLDRQNVNNIQDLVRYEPGVSVSGTGQRSGLNG 192

Query: 87  ITIRGMTGNRIAIVRDGIQSADGYGAADINDKYGRNTFSLSNVKQIQVVKGASSTLYGSG 146
             IRG+ G RI    DG+   D +          RN      VK++++++G +S LYGS 
Sbjct: 193 YNIRGIDGERILTQVDGVSIPDSFFYGPYAQTQ-RNYVDPEIVKRVEILRGPASVLYGSN 251

Query: 147 AIGGVVIIESKAPEDYLY-HRDYYVDAALTYSGISNRYQGNHALAMRHGDGEALLTIDYW 205
           AIGG V   +  P+D +   +D        YS     +  +  +A R GD + LL +   
Sbjct: 252 AIGGAVSYFTLDPDDIIKPGKDVGARLKTGYSSADESWLTSATVAGRQGDFDGLLHLSQR 311

Query: 206 QGEETRNFNQDLYNREVDGYNLGFSHHYWLNDA-LRLKTHLEYFDDYAKRREGTSSIQKD 264
            G ET        +   DG +   ++        +  K    Y DD   R   T    KD
Sbjct: 312 NGHETETHG----SHSGDGLSRTEANPMDARTTNVLAKLGWNYADD--ARLGFTYERYKD 365

Query: 265 DKWDLVSFYEYQRSQTRLASVGADYTANLSWM---------DTLEGKFY----------- 304
           D           R Q  L++VG  +      M         DT+  + +           
Sbjct: 366 D-----------RDQNILSAVGGPFIPGFGGMNSYRMRQGNDTITRERFGLNHEFDLDSV 414

Query: 305 ------WRSTENITQTNRLMANDRSGAGILSYRRELRDEGFNDEALGATLNAQKEWQQGE 358
                 W     I +T++        +G   +R   R   + D          K +  G+
Sbjct: 415 VADHVKWSFNYQIAKTDQRTDELYVASGRQVFRD--RQTTYKDRQWVFDAQLDKAFSIGQ 472

Query: 359 WLHQFAYGMSVDGHDYQRPKS-------------IRRMESSGDDLQADEPFAPAREYRFG 405
             H F YG ++        +S                 +S+ D       F       + 
Sbjct: 473 TDHLFTYGTTLKQEKVTGSRSGTGTCLNIGGTCTAIGQDSARDGQALVSDFPDPTVNTYS 532

Query: 406 VYGQDNLLLGDWTLAAGLRFDAQKLSPKNTDRI------HGYKVVTMGSSE--W---SPS 454
           ++ QD +   +WT   G R+D  ++ PK T+         G        S+  W   SP 
Sbjct: 533 LFAQDEIRWNNWTFMPGARYDYTRMEPKFTEEFLRGLESSGTAPTAQDDSDKKWHRVSPK 592

Query: 455 ASISYQWHPEWNTYLSYNHGFRAPSYDKAYGASDHSFVPLTPFIIKPNNKLRAETSDSFE 514
             ++Y ++  +  Y  Y  GFR P+    YG   +       + ++ N  L  E S S+E
Sbjct: 593 FGLTYAFNDNYTWYGQYAEGFRTPTAKAMYGRFQNLD---QGYRVEGNPNLEPEKSKSYE 649

Query: 515 LGSKYDNGQTQFYVAVFYSIFDNFIDVKQVGYDNATGSVIQQYQNIAGVKTYGAEMSVMH 574
            G + +     F VAVFY+ + +FID   V   N   +   Q  NI      GAE     
Sbjct: 650 TGLRGNFDAGNFDVAVFYNKYRDFIDEDAVQSANLEQTF--QANNIKHATIKGAEFKGRL 707

Query: 575 RLDDRWS-----VENKLGYVDGK-DGENQYVRTLTPLEGSVQLNYQRERWDAYSRLNWAS 628
            LD   +      +  + Y  G+ D   Q + ++ PL+G   L Y+++ +          
Sbjct: 708 NLDHFGAPQGLYTQTSIAYTYGRNDDTGQPLNSVNPLKGVFGLGYEQQNYGGLLSWTLVK 767

Query: 629 AMSRVPTCT-TEQGKETECATTTGWVSWDIGLNYQWNAQLSASFNVVNLLDREYTRYQDV 687
             +RV   T       T    T G+   D+   Y+    ++ +  + NL D++Y ++  V
Sbjct: 768 RKTRVDDSTFYSPDGSTSKFRTPGYGVLDLTGYYKVTDDVTINAGLYNLTDKKYWQWDSV 827

Query: 688 --------AGVT-PSDTLYSTEPGRYFTVH 708
                   A VT P++    T PGR F ++
Sbjct: 828 RSYDGQGEAAVTQPANIDRLTMPGRNFGIN 857