Pairwise Alignments

Query, 713 a.a., ligand-gated channel from Vibrio cholerae E7946 ATCC 55056

Subject, 656 a.a., Outer membrane receptor for ferrienterochelin and colicins from Enterobacter asburiae PDN3

 Score = 74.3 bits (181), Expect = 2e-17
 Identities = 47/156 (30%), Positives = 81/156 (51%), Gaps = 1/156 (0%)

Query: 2   KLSPVSAAVLSVLAAGFAHAETEPSHYEEVVVTANRIEQPLSEVAGSVAVLEGETLEKQG 61
           +L+P     L   A   A         + +VVTA+  EQ L +   S++V+  E L+++ 
Sbjct: 3   RLNPFVRGGLCASAMSLALPVIAAESGDTMVVTASATEQNLKDAPASISVITQEDLQRKP 62

Query: 62  KTELYDALNQEPGVSVTGGAGRPQNITIRGMTGNRIAIVRDGIQSADGYGAADINDKYGR 121
              L D L + PGV +T      + ++IRG+  +   I+ DG +  +   A   ++ +  
Sbjct: 63  VQNLKDVLREVPGVQLTSEGDNRKGVSIRGLDSSYTLILIDG-KRVNSRNAVFRHNDFDL 121

Query: 122 NTFSLSNVKQIQVVKGASSTLYGSGAIGGVVIIESK 157
           N   +  +++I+VV+G  S+LYGS A+GGVV I +K
Sbjct: 122 NWVPVDAIERIEVVRGPMSSLYGSDALGGVVNIITK 157



 Score = 60.1 bits (144), Expect = 3e-13
 Identities = 76/295 (25%), Positives = 109/295 (36%), Gaps = 63/295 (21%)

Query: 451 WSPSASISYQWHPEWNTYLSYNHGFRAPSY---------DKAYGASDHSFVPLTPFIIKP 501
           WSP A + Y           +   F+APS              GA +          I  
Sbjct: 393 WSPRAYLVYNATDTVTVKGGWATAFKAPSLLQLSPDWVTGSCRGACE----------IVG 442

Query: 502 NNKLRAETSDSFELGSKYDNGQ-----TQFYVAVFYSIFDNFIDVKQV-------GYDN- 548
           N  L+ ETS+SFE G  Y   +      Q  V  F +  D+ I + +        GY N 
Sbjct: 443 NPDLKPETSESFEFGLYYSGEEGWLEGVQASVTTFQNNVDDRISISRTANAKQAQGYPNY 502

Query: 549 ----ATGSVIQQYQNIAGVKTYGAEMSVMHRLDDRWSVENKLGYVDGKDGENQYVRTLTP 604
               A G  I +Y N+   +  G E  V   + + W V     Y DG+D  N   + L+ 
Sbjct: 503 VGLNADGEPIFRYYNVNKARIRGVETEVKFPVAEDWKVTLNYTYNDGRDISNGGNKPLSD 562

Query: 605 L-----EGSVQLNYQRERWDAYSRLNWASAMSRVPTCTTEQGKETECATTT-GWVSWDIG 658
           L      G+V     ++ W  Y + N+          T E+   T  A T  G+V W+ G
Sbjct: 563 LPFHTANGTVDWKATQD-WSFYVQGNY----------TGEKRALTSSAPTPGGYVIWNTG 611

Query: 659 LNYQWNAQLSASFNVVNLLDREYTRYQDVAGVTPSDTLYSTEPGRYFTVHAKYVF 713
             +Q    +     V NLLD++ +R          D    TE GR + V   Y F
Sbjct: 612 AAWQVTKAVKLRAGVQNLLDKDLSR----------DDYSYTEDGRRYFVGVDYKF 656