Pairwise Alignments

Query, 713 a.a., ligand-gated channel from Vibrio cholerae E7946 ATCC 55056

Subject, 746 a.a., outer membrane heme receptor from Agrobacterium fabrum C58

 Score =  149 bits (377), Expect = 4e-40
 Identities = 175/738 (23%), Positives = 296/738 (40%), Gaps = 86/738 (11%)

Query: 19  AHAETEPSHYEEVVVTANRIEQPLSEVAGSVAV-LEGETLEKQGKTELYDALNQ-EPGVS 76
           A  E   +  E++VV   R++   +     +A     E + K+    + D  N  EPGV 
Sbjct: 31  ASQENGTTTLEKIVVKGKRVKSANAAADTPLASQTTAEDIRKKDIGSIKDLGNTTEPGVD 90

Query: 77  -VTGGAGRPQNITIRGMTGNRIAIVRDGIQ-------SADGYGAADINDKYGRNTFSLSN 128
            V    GRP  + IRG+ G R+  + D I        +  G     ++D    ++F  S+
Sbjct: 91  YVDSKPGRPGGLFIRGLGGARVVTLIDNIPVPYFNNFARQGQATTTLSDT--SSSFDFSS 148

Query: 129 VKQIQVVKGASSTLYGSGAIGGVVIIESKAPEDYLYH-RDYYVDAALTYSGISNRYQGNH 187
           +  + VV+GA S+  GSGA+GG +++ +  PED +   +D+   A  +Y        G+ 
Sbjct: 149 LSSVDVVRGADSSRIGSGALGGALVLRTLEPEDLIGEGKDWGGVAKTSYDSEDRSVGGSL 208

Query: 188 ALAMRHGDGEALLTIDYWQGEETRN-FNQDLYN------REVDGY--NLGF--------- 229
           A+A +  +   L    Y +G ET N    D+Y          D Y  NL F         
Sbjct: 209 AVAKKIENTSVLFQGSYKRGNETDNRGTADIYGTRRTKPNPADTYESNLMFKIRQDLEGG 268

Query: 230 ------SHHYWLNDALRLKTHLEYFDDYAKRREGTSSIQKDDKWDLVSF-YEYQRSQTRL 282
                 +  Y L +   +KT        +  R G     +D + D VS  YEY+   T  
Sbjct: 269 HRIGLTAERYSLRNRSDMKTLQGVSVSGSTYRIGDYRGYEDTERDRVSLDYEYEAPSTD- 327

Query: 283 ASVGADYTANLSWMDTLEGKFYWRSTENITQTNRLMANDRSGAGILSYRRELRDEGFNDE 342
              G    ANLS         YW          RL     +G  + +    +R++   + 
Sbjct: 328 ---GVIDAANLS--------LYW---------TRLSKESGAGDRLTNNSLYIREDSMRNS 367

Query: 343 ALGATLNAQKEWQQGEWLHQFAYGMSVDGHDYQRPKSIRRMESSGDDLQADEPFAPAREY 402
           A G     +  ++ G   H   +G +    D+ + +            Q+D P    +  
Sbjct: 368 AFGIVGGLESGFELGGVQHTVRFGGNAMTTDFSQ-ELFANTAGVTSSSQSDMPDVSGKS- 425

Query: 403 RFGVYGQDNLLLGD-WTLAAGLRFDAQKLSPK-NTDRIHGYKVVTMGS----SEWSPSAS 456
             G+Y  D +  G+ + L  GLRFD+    P  +     GY+   + S    S +SP   
Sbjct: 426 -LGLYLDDEIAFGNGFRLTPGLRFDSYDYDPDGSVSSNSGYRTFGLPSGNSGSRFSPKLL 484

Query: 457 ISYQWHPEWNTYLSYNHGFRAPSYDKAY-GASDHSFVPLTPFIIKPNNKLRAETSDSFEL 515
            +Y   PE   +  ++  +RAP+ ++ Y   S+ S    + + +  N+ L  ETS+ FE+
Sbjct: 485 ATYDVTPELQLFAQWSMAYRAPTINELYLNFSNIS----SGYAVVGNSALNPETSNGFEI 540

Query: 516 GSKYDNGQTQFYVAVFYSIFDNFIDVKQV------GYDNATGSVIQQYQNIAGVKTYGAE 569
           G+ Y +G     + +F++ + +FI+          G+       +  Y+N   V+  G E
Sbjct: 541 GANYASGDLTGSLTLFHNKYKDFIEQYTTSTTLFPGFGGRGNGSLFTYRNRNNVEISGVE 600

Query: 570 MSVMHRLDDRWSVENKLGYVDGKDGE-NQYVRTLTPLEGSVQLNYQRERWDAYSRLNWAS 628
             V   L + +     L Y  GKD + N+++RT+ P +  + + Y +E W       ++S
Sbjct: 601 AKVRKELANGFFAHASLAYAYGKDTDTNEFIRTVAPFKSILGVGYAQEVWGTELTGVFSS 660

Query: 629 AMSRVPTCTTEQGKETECATTTGWVSWDIGLNYQWNAQLSASFNVVNLLDREYTRYQDVA 688
            M      +T           TGW  W+     +    L     V NL DR+Y     V 
Sbjct: 661 GMRDDGVASTFDAPGYGVFNLTGW--WE----PEQTKGLRIQAGVYNLFDRKYWNGVGVR 714

Query: 689 GVTPSDTLYSTEPGRYFT 706
            V P+      +P  ++T
Sbjct: 715 DVNPNSVSTVNQPVDFYT 732