Pairwise Alignments

Query, 713 a.a., ligand-gated channel from Vibrio cholerae E7946 ATCC 55056

Subject, 732 a.a., Ferric aerobactin receptor from Acinetobacter radioresistens SK82

 Score = 95.9 bits (237), Expect = 6e-24
 Identities = 169/775 (21%), Positives = 302/775 (38%), Gaps = 150/775 (19%)

Query: 1   MKLSPVSAAVLSVLAAGFAHAETEPSHYEE------------VVVTANRIEQPLSEVAGS 48
           M+LS  S   L+V  +   +AE   S  +E            +VVTA R  + ++E+AG+
Sbjct: 1   MRLSQFSLCFLTVAISSLLYAEDSGSELKELKNSDKTMKLSPIVVTATRTPKTIAEIAGT 60

Query: 49  VAVLEGETLEKQ--GKTELYDALNQ-EPGVSVTGGAGRPQNITIRGMTGNRIAIVRDGIQ 105
           V  ++GE + +Q     ++ D L Q  P ++ + G       T+R   G  + ++ DG+ 
Sbjct: 61  VQTIQGEDIAQQAGASRKVADVLAQLVPSLAPSSGTTSNYGQTMR---GRNVLVMIDGVS 117

Query: 106 SADGYGAADINDKYGRNTFSLSNVKQIQVVKGASSTLYGSGAIGGVVIIESKAPE---DY 162
                G+ D+  +   N+ S + +  I+VV GA+S +YGSGA GG++ I +K  +    +
Sbjct: 118 QT---GSRDVARQL--NSISPNMIDHIEVVSGATS-IYGSGATGGIINIITKRADKSKPF 171

Query: 163 LYHRDYYVDAALTYSGISNRYQGNHALAMRHGDGEALLTIDY------------------ 204
            +     + +A  +   S  YQ     +  +   +  L +DY                  
Sbjct: 172 SFQTKLGLTSADNFRRDSLAYQVGQTASFNNDKMDGFLGVDYTSRGSQFDGKDNRIPLSP 231

Query: 205 WQGE----ETRNFNQDLYNREVDGYNLGFSHHYWLNDALRLKTHLEYFDDYAKRREGTSS 260
           WQG      T + N  L     D  +L F   Y+ ND    +   EY  DY+  ++GT  
Sbjct: 232 WQGSTMDTNTLDVNGRLNFNLTDQQSLSFGTQYY-ND----EQDTEYGPDYSYLQKGTQP 286

Query: 261 IQKDDK-WDLVSFYEYQRSQTRLASVGADYTANLSWMDTLEGKFYWRSTENITQTNRLMA 319
             K  K W L      ++  T   +    Y        TL  + Y+R+     +  R + 
Sbjct: 287 SYKAIKGWSL-----DKQPFTERYAFNTQYQNQDFLGQTLNIEAYYRN-----EKARFVP 336

Query: 320 NDRSGAGILSYRRELRDEGFNDEALGATLNAQKEWQQGEWLHQFAYGMSVDGH------D 373
              S  G+     +++    N +  G     Q + Q  +   +  YG+  DG       D
Sbjct: 337 YGYSKDGV-----DVKQSQSNVDYAGIRSTVQSDLQVADRALRLTYGLDYDGEKDHQWAD 391

Query: 374 YQRPKS-------IRRMESSGDDLQADEPFAPAREYRFGVYGQDNLLLGD-WTLAAGLRF 425
           Y +P +         + ES+G D          R    G + Q +  + D   + AG+R+
Sbjct: 392 YYKPSNNGLVYTPTGKKESAGPD---------TRIQNIGTFVQGDYAITDRLNIQAGVRY 442

Query: 426 DAQKLSPKNTDRIHGYKVVTMGSSEWSPSASI------SYQWHPEWNTYLSYNHGFRAPS 479
             Q +           K +T+ +++ + S  +       Y+       Y +++ G+  P 
Sbjct: 443 --QYVQADTDSYFTARKPITLMAADSTDSDKLLFNLGTVYELTDIQQVYANFSQGYSYPD 500

Query: 480 YDKAY--GASDHSFVPLTPFIIKPNNKLRAETSDSFELGSKYDNGQTQFYVAVFYSIFDN 537
             +    G + ++   LT   I P       T +S+ELG + +               DN
Sbjct: 501 VQRVLRDGVAGYT---LTTSGIAP------ITVNSYELGWRLNQ--------------DN 537

Query: 538 FIDVKQVGYDNATGSVIQ----QYQNIAGV--KTYGAEMSVMHRLDDRWSVENKLGYVDG 591
            I++   G+ N +  V+Q    +  N+     + YGAE +V +   + + V   LGY  G
Sbjct: 538 GINLALTGFYNTSDKVVQFNSDRSVNVVDTDQRIYGAEATVSYPFIENYKVGGTLGYTRG 597

Query: 592 --KDGENQY----VRTLTPLEGSVQLNYQRERWDAYSRLNWASAMSRVPTCTTEQ----- 640
             KD  N +       ++P +G++   +  E+   Y       A+        +      
Sbjct: 598 QYKDVANNWHELNAFAVSPTKGTLFAEWSNEQ--GYGVRAQIQAIKGTDKAYKDDQALKA 655

Query: 641 ---GKETECATTTGWVSWDIGLNYQWNAQLSASFNVVNLLDREY-TRYQDVAGVT 691
                    A   G+ + D+  ++   A+    F + NL DR+Y T +   A VT
Sbjct: 656 AGLTDSNSAAEIKGYTTMDVLAHFPM-AKGRVDFGIYNLWDRQYKTVFAQQAAVT 709