Pairwise Alignments

Query, 665 a.a., S9 family peptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 684 a.a., Protease 2 from Pseudomonas sp. DMC3

 Score =  268 bits (686), Expect = 5e-76
 Identities = 204/661 (30%), Positives = 318/661 (48%), Gaps = 37/661 (5%)

Query: 24  YQWLRDDSRSEPAVKQFLAEHNRKTDHWFAPAKPLVQELVNEWQ----QTSQHKAPP--P 77
           Y WL++  R   AV  +L   N   +   A    L + L NE +    +T      P  P
Sbjct: 22  YAWLQE--RDTDAVLDYLKAENAYQEAQTADQAELRESLFNEIKGRILETDLSLPSPWGP 79

Query: 78  ALIYANQQYNDIQWNGHRHIVKIGA------QGQIEPLLNLSARAEPFDYYQLASWSLDR 131
            L Y      D ++  H    +         + + + LL+ +A A    ++ L ++S+  
Sbjct: 80  YLYYTRTTAGD-EYARHYRCPRPADDSLTLDESREQLLLDPNALANG-GFFSLGAFSISP 137

Query: 132 SVQSVALAEDTRGDEQFKLTIVRLA-DRTEQIVSETASTYFAWAADGKSLYY--LSDLNG 188
             Q +A + D  GDE + L +  L+ DR  ++  E       WA D  +L++  L D + 
Sbjct: 138 DHQRLAYSVDASGDEIYTLFVKELSNDRVSELEFEDCDGSMTWANDSLTLFFGVLDDTHR 197

Query: 189 STQLQRFELETGQSTRLAEWRSAEWLFSLYSASNPRYLVVQQNNENSTQQRLLDTQTGEL 248
             +L R+ L+   +  +       +    Y AS+ + L++   ++ +++   LD     L
Sbjct: 198 PHKLFRYRLDGTAAEEVFHEPDGRFFLHCYRASSEQQLLLSLGSKTTSEVWALDANQPHL 257

Query: 249 -----MPWLRTTEPGLEYYADVLGETLYINSNHQGA-FRLYRQP----LHTKQDWQSVTT 298
                 P +   E  +++       T +I +N  G  F LY+ P      ++ +WQ++  
Sbjct: 258 PFSCLAPRVEDHEYDVDHGLLDGVWTWFIRTNRDGINFALYQAPDTGVPPSEAEWQNLIP 317

Query: 299 HKEIGSLSNFYLFDAGIVLVENQTLAPKVWVLDSQGEVRTHFELRDLGQVAWISRNGDAV 358
           H E   L    L    + L   +   P + V   QG      +L D      +  + +  
Sbjct: 318 HNEEVMLDGVSLNAEAMTLSLREGGLPIIEV-HPQGLASYRVQLPDAAYSLHVQNSLEFE 376

Query: 359 SNRLRVRTMSMTEPASWHELDVAQLQWQQLSQDHY-ADFDPKQYQTQTVWVTQ-GAIQVP 416
           S+R+R+R  ++  PA   +L +A  +   L +      FD   Y +Q +W T     QVP
Sbjct: 377 SDRIRLRYEALNRPAQVRQLILASGEQTVLKETPVLGQFDADAYVSQRLWATAPDGTQVP 436

Query: 417 VTLAYRSDKLTPNSSVVLYGYGAYGVTMKPYFMPQIVSLLDRGMIYAIAHVRGGGYLGEA 476
           ++L  + + +     + LYGYGAYG ++ P+F    +SLLDRGM +AIAHVRGGG LGEA
Sbjct: 437 ISLVMKREMVGKPVPLYLYGYGAYGSSLDPWFSHARLSLLDRGMAFAIAHVRGGGELGEA 496

Query: 477 WHQAGAGLNKQNGIDDFLAAARYL--THFQQGERAIYTIGGSAGGTLVAAALNQQPNLFA 534
           W++AG   +K N   DF+A A +L        E+   + GGSAGG L+ A LNQ+P+LF 
Sbjct: 497 WYRAGKQEHKHNTFSDFIACAEFLILNGITTAEKLAIS-GGSAGGLLIGAVLNQRPDLFG 555

Query: 535 GAVLQVPFVDVLASMSDTSQALTAQQYQEWGNPQQPEQRQVMQAYDPLSNLRAAPYPPTL 594
            A+ +VPFVDVL +M D    LT  +Y EWGNP++P+    ++AY P  N+ A  YPP L
Sbjct: 556 VAIAEVPFVDVLNTMLDPELPLTVTEYDEWGNPEEPDVYDRIKAYAPYENVTAQAYPPLL 615

Query: 595 VNVGWWDNRVPYWEGARYLARLSDVSQGAGPYLLSTDFQAGHA--SDRRQALEKQAREYA 652
           V  G+ D+RV YWE A+++A+L          LL T+  AGH   S R Q L   A EYA
Sbjct: 616 VIAGYNDSRVQYWEAAKWVAKLRATKTDDNVLLLKTELGAGHGGMSGRYQGLRDVALEYA 675

Query: 653 F 653
           F
Sbjct: 676 F 676