Pairwise Alignments

Query, 665 a.a., S9 family peptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 686 a.a., protease II (NCBI) from Escherichia coli BW25113

 Score =  303 bits (775), Expect = 2e-86
 Identities = 206/663 (31%), Positives = 323/663 (48%), Gaps = 37/663 (5%)

Query: 23  DYQWLRDDSRSEPAVKQFLAEHNRKTDHWFAPAKPLVQELVNEW-QQTSQHKAPPPALIY 81
           +Y WLRDD+RS+P V  +L + N       A  + L   ++ E   +  Q +   P   Y
Sbjct: 22  NYYWLRDDTRSQPEVLDYLQQENSYGHRVMASQQALQDRILKEIIDRIPQREVSAP---Y 78

Query: 82  ANQQYNDIQWNGHRHIVKIGAQGQI--------------EPLLNLSARAEPFDYYQLASW 127
               Y       +RHI + G +  I              E LL+ + RA   ++Y +   
Sbjct: 79  IKNGYR------YRHIYEPGCEYAIYQRQSAFSEEWDEWETLLDANKRAAHSEFYSMGGM 132

Query: 128 SLDRSVQSVALAEDTRGDEQFKLTIVRL-ADRTEQIVSETASTYFAWAADGKSLYYLSDL 186
           ++      +ALAED     Q+ +    L        + +     F WA D    YY+   
Sbjct: 133 AITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVEPSFVWANDSWIFYYVRKH 192

Query: 187 NGST---QLQRFELET--GQSTRLAEWRSAEWLFSLYSASNPRYLVVQQNNENSTQQRLL 241
             +    Q+ R  + T   Q   + E +   +  SL+  ++  Y+V+   +  +++ RLL
Sbjct: 193 PVTLLPYQVWRHAIGTPASQDKLIYEEKDDTYYVSLHKTTSKHYVVIHLASATTSEVRLL 252

Query: 242 DTQTGELMPWL-RTTEPGLEYYADVLGETLYINSNHQGA-FRLYRQPLHTKQDWQSVTTH 299
           D +  +  P++        EY  D      Y+ SN  G  F LYR  +  +Q W+ +   
Sbjct: 253 DAEMADAEPFVFLPRRKDHEYSLDHYQHRFYLRSNRHGKNFGLYRTRMRDEQQWEELIPP 312

Query: 300 KEIGSLSNFYLFDAGIVLVENQTLAPKVWVLDSQGEVRTHFELRDLGQVAWISRNGDAVS 359
           +E   L  F LF   +V+ E Q     +  ++ +          D   V WI+ N +  +
Sbjct: 313 RENIMLEGFTLFTDWLVVEERQRGLTSLRQINRKTREVIGIAFDDPAYVTWIAYNPEPET 372

Query: 360 NRLRVRTMSMTEPASWHELDVAQLQWQQLSQDHYADFDPKQYQTQTVW-VTQGAIQVPVT 418
            RLR    SMT P +  ELD+   + + L Q     F    Y+++ +W V +  ++VPV+
Sbjct: 373 ARLRYGYSSMTTPDTLFELDMDTGERRVLKQTEVPGFYAANYRSEHLWIVARDGVEVPVS 432

Query: 419 LAY-RSDKLTPNSSVVLYGYGAYGVTMKPYFMPQIVSLLDRGMIYAIAHVRGGGYLGEAW 477
           L Y R      ++ +++YGYG+YG ++   F    +SLLDRG +YAI HVRGGG LG+ W
Sbjct: 433 LVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQW 492

Query: 478 HQAGAGLNKQNGIDDFLAAARYLTHFQQGERAI-YTIGGSAGGTLVAAALNQQPNLFAGA 536
           ++ G  L K+N  +D+L A   L     G  ++ Y +GGSAGG L+  A+NQ+P LF G 
Sbjct: 493 YEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYAMGGSAGGMLMGVAINQRPELFHGV 552

Query: 537 VLQVPFVDVLASMSDTSQALTAQQYQEWGNPQQPEQRQVMQAYDPLSNLRAAPYPPTLVN 596
           + QVPFVDV+ +M D S  LT  +++EWGNPQ P+  + M++Y P  N+ A  YP  LV 
Sbjct: 553 IAQVPFVDVVTTMLDESIPLTTGEFEEWGNPQDPQYYEYMKSYSPYDNVTAQAYPHLLVT 612

Query: 597 VGWWDNRVPYWEGARYLARLSDVSQGAGPYLLSTDFQAGHA--SDRRQALEKQAREYAFF 654
            G  D++V YWE A+++A+L ++       LL TD  +GH   S R ++ E  A EYAF 
Sbjct: 613 TGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGKSGRFKSYEGVAMEYAFL 672

Query: 655 LTL 657
           + L
Sbjct: 673 VAL 675