Pairwise Alignments

Query, 665 a.a., S9 family peptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 699 a.a., protease II from Agrobacterium fabrum C58

 Score =  235 bits (599), Expect = 6e-66
 Identities = 195/668 (29%), Positives = 301/668 (45%), Gaps = 41/668 (6%)

Query: 23  DYQWLRDDSRS---------EPAVKQFLAEHNRKTDHWFAPAKPLVQELVNEWQQTSQHK 73
           DY W R D+           +PA++  L   N   +      + L ++L  E +   +  
Sbjct: 30  DYAWFRADNWQAMFKDPTLLDPAIRAHLEAENAYMEAAMGDTRALQEKLFEEMKGRIKQD 89

Query: 74  APPPALIYANQQYNDIQWNGHR--HIVKIGAQG-QIEPLLNLSARAEPFDYYQLASWSLD 130
                +      Y  +   G    H  +    G     LL+    A+  DY++LA  +  
Sbjct: 90  DSSVPVNDGPYAYGTLFVTGGEQPHYFRTPRDGGDKHVLLDGDKEAQGKDYFRLAGLNQS 149

Query: 131 RSVQSVALAEDTRGDEQFKLTIVRLADRTEQI-VSETASTYFAWAADGKSLYY-LSDLNG 188
                     D +G E F L I  L    +   V E      AWA DGKS +Y L D N 
Sbjct: 150 SDHSHGIWGYDDKGSEYFTLRIRNLETGEDLADVVENTGGGGAWAPDGKSFFYTLQDENH 209

Query: 189 --STQLQRFELETGQSTRLA-EWRSAEWLFSLYSASNPRYLVVQQNNENSTQQRLLDTQT 245
             S        E   + RL  E +   +   + ++    ++ +  ++  +++ R+L T+ 
Sbjct: 210 RPSKVFHHIIGEPQSADRLVYEEKDPGFFMGVGASVLDDFIFIDIHDHETSEYRILSTKD 269

Query: 246 GELMPWL-RTTEPGLEYYADVLGETLYINSNHQGA--FRLYRQPLHT--KQDWQSVTTHK 300
               P +    E G+EY     G+  +I +N   A  FR+   P+    K++W+ V  H+
Sbjct: 270 LTAEPKVVAEREEGIEYSMCEGGDVFFILTNDGDAKDFRIMEAPVTAPGKENWKEVVPHE 329

Query: 301 EIGSLSNFYLFDAGIVLVENQTLAPKVWVLDSQGEVRTHFELRDLGQVAWISRNGDAVSN 360
               + +   +   ++ +E +   P++ + D +          +      +    +  ++
Sbjct: 330 PGRLILSVDAYARHLIWLERRDGLPRIVIRDRRTGEEHSIAFAEEAYSLGLHGAAEYDTD 389

Query: 361 RLRVRTMSMTEPASWHELDVAQ-----LQWQQLSQDHYADFDPKQYQTQTVWV-TQGAIQ 414
            +R    SMT P+   + ++       L+ Q++   H    +P  Y T+ +         
Sbjct: 390 VIRFSYSSMTTPSQLFDYNMVTRDRTLLKTQEVPSGH----NPDDYITRRIMAPAHDGEL 445

Query: 415 VPVTLAYRSD-KLTPNSSVVLYGYGAYGVTMKPYFMPQIVSLLDRGMIYAIAHVRGGGYL 473
           VPV+L YR D  L  ++  +LYGYGAYG+T+   F    +SL DRG IYAIAH+RGG   
Sbjct: 446 VPVSLLYRKDVPLDGSAPCLLYGYGAYGITIPASFSTTTLSLADRGFIYAIAHIRGGKDK 505

Query: 474 GEAWHQAGAGLNKQNGIDDFLAAARYLTHFQQG---ERAIYTIGGSAGGTLVAAALNQQP 530
           G  W++ G   NKQN   DF+AAA +L   Q+G      I   GGSAGG L+ A  N  P
Sbjct: 506 GFEWYETGKMENKQNTFKDFIAAADHLV--QEGFTSYEGIIAEGGSAGGMLMGAVANMAP 563

Query: 531 NLFAGAVLQVPFVDVLASMSDTSQALTAQQYQEWGNPQQPEQRQ-VMQAYDPLSNLRAAP 589
             FAG +  VPFVDVL +M D +  LT  ++ EWGNP + E+    + AY P  N+    
Sbjct: 564 EKFAGIIAAVPFVDVLTTMLDDTLPLTPPEWPEWGNPLESEEEYGWIAAYSPYDNVGEKS 623

Query: 590 YPPTLVNVGWWDNRVPYWEGARYLARLSDVSQGAGPYLLSTDFQAGHA--SDRRQALEKQ 647
           YPP L   G  D RV YWE  +++A+L + + G  P LL T+  AGH   S R Q LE+ 
Sbjct: 624 YPPLLALSGLTDPRVTYWEPTKWVAKLREKTTGEAPILLKTNMAAGHGGKSGRFQRLEEV 683

Query: 648 AREYAFFL 655
           A EYAF L
Sbjct: 684 AFEYAFAL 691