Pairwise Alignments

Query, 452 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 532 a.a., ATP-dependent RNA helicase RhlE from Xanthobacter sp. DMC5

 Score =  248 bits (634), Expect = 3e-70
 Identities = 147/371 (39%), Positives = 210/371 (56%), Gaps = 5/371 (1%)

Query: 5   LQFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLPML 64
           + F +LGL +++L  +A   +   T IQ QAIP  +A RD+L  ++TG+GKT AF LPML
Sbjct: 1   MSFSELGLSDKVLAAVADTGYTTPTPIQAQAIPHVLARRDVLGLAQTGTGKTAAFTLPML 60

Query: 65  HKSLKTKAFSAKDPRGLILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFNDQVKAL 124
               + +A  A+ PR LIL PTRELA QV                L+ GG +F DQ   L
Sbjct: 61  TLLEQGRA-RARMPRTLILEPTRELAAQVEENFTRYGKYSKLNVALLIGGVSFGDQDTKL 119

Query: 125 ARGPRFIVATPGRLADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRRIHNAAKHRRR 184
            RG   ++ATPGRL DH++   L L G+E LV+DEADRMLD+GF  ++ RI       R 
Sbjct: 120 VRGVDVLIATPGRLLDHVERGRLLLSGIEVLVIDEADRMLDMGFIPDIERICKLVPFTR- 178

Query: 185 QTLMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDH--KEALLD 242
           QTL FSAT+   ++  +  + L+ P R+ +   +     +TQ        D+  +E L +
Sbjct: 179 QTLFFSATMP-PEIQRLVSQFLSSPVRVEVSKPASTATTVTQELVASGREDYEKREVLRE 237

Query: 243 RILADAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFERAVFK 302
            I +    +  IIF   + D   L   L ++   AVAL G+++Q  R   + +F      
Sbjct: 238 LIRSCENLQNGIIFCNRKRDVAVLHRSLQKHGFNAVALHGDMDQHARIKALDEFRNGEAT 297

Query: 303 ILVTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLVGPKDWESF 362
           +LV +DVA+RGLDIPAV+HV N+D+P H+E+YVHR+GRTGRAG  G A ++V   D +S 
Sbjct: 298 LLVASDVAARGLDIPAVSHVFNYDVPHHSEDYVHRIGRTGRAGRAGTAYTMVTHLDAKSL 357

Query: 363 KRVEAFLQQEI 373
             +E  +   I
Sbjct: 358 SAIEKLIGNPI 368