Pairwise Alignments

Query, 452 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., DEAD/DEAH box helicase from Pseudomonas simiae WCS417

 Score =  271 bits (694), Expect = 3e-77
 Identities = 158/419 (37%), Positives = 237/419 (56%), Gaps = 13/419 (3%)

Query: 5   LQFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLPML 64
           + F  LGL   L++ +    + + T +QQ+AIP  + GRDL+ +++TG+GKT  F LP+L
Sbjct: 1   MSFASLGLSEALVRAIEAAGYTEPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPIL 60

Query: 65  HKSL------KTKAFSAKDPRGLILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFN 118
            +        K++    + PR L+L PTRELA QV+   +     L + +  I GG   N
Sbjct: 61  ERLFPNGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKLYARDLKFVSACIFGGVGMN 120

Query: 119 DQVKALARGPRFIVATPGRLADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRRIHNA 178
            QV+A++RG   +VA PGRL D     S+ L  +E LVLDEADRMLD+GF  +++++  A
Sbjct: 121 PQVQAMSRGVDVLVACPGRLLDLCGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVL-A 179

Query: 179 AKHRRRQTLMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDHKE 238
               +RQ L+FSAT    D+  +A +LL+ P+RI +   +   + I Q  +      HK 
Sbjct: 180 RLPAKRQNLLFSATFSQ-DITALAGKLLHNPERIEVTPPNTTVERIEQRVFRLA-ASHKR 237

Query: 239 ALLDRILADAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFER 298
           ALL  ++    + QV++FT T+   +RL E L+++ L AVA+ GN +Q  R   +  F+ 
Sbjct: 238 ALLAHLITAGAWEQVLVFTRTKHGANRLAEYLDKHGLTAVAIHGNKSQNARTKALADFKA 297

Query: 299 AVFKILVTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLVGPKD 358
              +ILV TD+A+RGLDI  + HV+NF++P   E+YVHR+GRTGRAG  G+A+SLV P +
Sbjct: 298 GSVRILVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAISLVAPDE 357

Query: 359 WESFKRVEAFLQQEIQFEVLAGLEGKFKGLKPRQAKPKAAPTQRVNKAKAPSKSKKAAP 417
            +  K +E   +Q+I    L G    F        KP+A     V   + P   K   P
Sbjct: 358 EKLLKSIERMTKQKIADGDLMG----FDASAVEAEKPEARERPDVRNPRNPRGPKGDGP 412