Pairwise Alignments

Query, 452 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 444 a.a., DEAD/DEAH box helicase from Pseudomonas simiae WCS417

 Score =  253 bits (646), Expect = 9e-72
 Identities = 156/413 (37%), Positives = 227/413 (54%), Gaps = 12/413 (2%)

Query: 5   LQFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLPML 64
           + F  LGL   LL+ L    ++  T +Q QAIP  +AGRDL+A+++TG+GKT  F +P+L
Sbjct: 1   MTFATLGLIEPLLRALETLGYQTPTPVQAQAIPAVLAGRDLMAAAQTGTGKTAGFAVPLL 60

Query: 65  HK-SLKTKAFSAKDPRGLILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFNDQVKA 123
              +++    +A   R LIL PTRELA+QV+  +      L  T   + GG + N Q+  
Sbjct: 61  QLLTMEGPKVAANSARALILCPTRELAEQVHASVAEYAQNLPLTTYAVYGGVSINPQMMK 120

Query: 124 LARGPRFIVATPGRLADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRRIHNAAKHRR 183
           L +G   +VATPGRL D     +L L  L+TLVLDEADRMLDLGF++EL  I+     ++
Sbjct: 121 LRKGVDILVATPGRLIDLFRQNALKLNQLQTLVLDEADRMLDLGFSEELANIYRMLP-KK 179

Query: 184 RQTLMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDHKEALLDR 243
           RQTL+FSAT    D+  +A ++LN+P  I +   +     + Q     D    K  L   
Sbjct: 180 RQTLLFSATFSD-DIRLLAGQMLNDPLSIEVSPRNVAANTVKQWVVPVDK-KRKPELFVH 237

Query: 244 ILADAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFERAVFKI 303
           ++    ++QV++F  TR   D L +KL    + A  + G+  Q  R   + +F+ +  +I
Sbjct: 238 LMRKGRWKQVLVFAKTRNGVDALVDKLQGLGINADGIHGDKPQATRQRALDRFKSSEVQI 297

Query: 304 LVTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLVGPKDWESFK 363
           LV TDVA+RGLDI  +  V+NFD+P   E+Y+HR+GRTGRAGN G+A+SLV   +     
Sbjct: 298 LVATDVAARGLDIEDLPLVVNFDLPIVAEDYIHRIGRTGRAGNTGEAISLVCADEVNMLS 357

Query: 364 RVEAFLQQEIQFEVLAGLEGKFKGLKPRQAKPKA-APTQRVNKAKAPSKSKKA 415
            +E   +Q +   +    E       P    P   A  Q V K K P K K +
Sbjct: 358 AIEMLTRQTLTRHMEQDFE-------PEHRVPDTDASGQVVKKPKKPKKPKSS 403