Pairwise Alignments

Query, 452 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 601 a.a., ATP-dependent RNA helicase RhlE (EC 3.6.4.13) from Variovorax sp. SCN45

 Score =  256 bits (653), Expect = 2e-72
 Identities = 147/380 (38%), Positives = 224/380 (58%), Gaps = 7/380 (1%)

Query: 5   LQFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLPML 64
           + F +L L   +LK +  + +   T IQ QAIP  + G DLL  ++TG+GKT AF LPML
Sbjct: 1   MNFDELKLAPAILKAVHEHGYDTPTPIQAQAIPAVLDGHDLLGGAQTGTGKTAAFTLPML 60

Query: 65  HK----SLKTKAFSAKDPRGLILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFNDQ 120
           HK       T  F     R L+L PTRELA QV   +R+    L   +T+I GG   N Q
Sbjct: 61  HKLSMSRSATNKFGGTGIRALVLTPTRELAAQVEESVRTYGKYLQLDSTVIFGGVGMNPQ 120

Query: 121 VKALARGPRFIVATPGRLADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRRIHNAAK 180
           +  L +G   +VATPGRL D      L L  ++ L+LDEADRMLD+GF  ++++I  A  
Sbjct: 121 ISKLKKGVDILVATPGRLLDLQQQGMLDLSQVQMLILDEADRMLDMGFIHDVKKIL-ALV 179

Query: 181 HRRRQTLMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDHKEAL 240
            + +Q+L+FSAT    D+ D+A  LL  P+ I +   +   + ITQ  +       K+AL
Sbjct: 180 PKEKQSLLFSATFSD-DIRDLASTLLKNPQSIQVTPRNTTVQRITQVIHPVGR-GKKKAL 237

Query: 241 LDRILADAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFERAV 300
           L  I+ + ++ QV++FT T+   + + E L +N ++A+AL GN +Q+ R   +  F+   
Sbjct: 238 LAHIINENKWSQVLVFTRTKFGANSVAEFLTKNGIEAMALHGNKSQSARTQALAGFKSGD 297

Query: 301 FKILVTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLVGPKDWE 360
            + LV TD+A+RG+DI  + HV+N+++P  +E+YVHR+GRTGRAG+ G+A+S V   +  
Sbjct: 298 IRALVATDIAARGIDIDELPHVVNYEIPNVSEDYVHRIGRTGRAGSSGEAVSFVCLDEEG 357

Query: 361 SFKRVEAFLQQEIQFEVLAG 380
             + +E F +Q I  +++ G
Sbjct: 358 FMQEIERFTKQTIPVQIVEG 377