Pairwise Alignments

Query, 452 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 451 a.a., ATP-dependent RNA helicase RhlE from Vibrio cholerae E7946 ATCC 55056

 Score =  258 bits (660), Expect = 2e-73
 Identities = 149/408 (36%), Positives = 226/408 (55%), Gaps = 10/408 (2%)

Query: 7   FKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLPMLHK 66
           F  LGL   +LK +    +   + IQ QAIP  +AG+D++A+++TG+GKT  F LP+L  
Sbjct: 3   FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILEL 62

Query: 67  SLKTKAFSAKDPRGLILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFNDQVKALAR 126
             K     A   R LIL PTRELA Q+   +      L   + ++ GG   N Q++ + +
Sbjct: 63  LAKGPKVRANQVRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQRMCK 122

Query: 127 GPRFIVATPGRLADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRRIHNAAKHRRRQT 186
           G   +VATPGRL D  +  ++  + LE LVLDEADRMLD+GF +++ +I       +RQ 
Sbjct: 123 GADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLP-EKRQN 181

Query: 187 LMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDHKEALLDRILA 246
           L+FSAT    ++ ++A  L+N P  I++   +   + + Q  Y  D +  K  +L +++ 
Sbjct: 182 LLFSATFS-TEIRELAKGLVNNPVEISVSPANSTARTVEQCIYPAD-VKKKPDMLVKLVK 239

Query: 247 DAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFERAVFKILVT 306
           +  ++QV++F  T+   +RL   LN+  L A A+ GN +Q  R   +  F+    +ILV 
Sbjct: 240 EGNWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVA 299

Query: 307 TDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLVGPKDWESFKRVE 366
           TD+A+RG+DIP +  V+NF++PK  E+YVHR+GRTGRAG  G A+SLV   +      +E
Sbjct: 300 TDIAARGIDIPQLPQVVNFELPKIAEDYVHRIGRTGRAGEVGKAISLVSAIEAPELFAIE 359

Query: 367 AFLQQEIQFEVLAGLEGKFKGLKPRQAKPKAAPTQRVNKAKAPSKSKK 414
              Q  +    LAG E       P    P++    R  K K P K KK
Sbjct: 360 RLTQALLPRVNLAGFE-------PTNQLPESKLDTRPLKPKKPKKPKK 400