Pairwise Alignments

Query, 452 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 608 a.a., ATP-dependent RNA helicase RhlE from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  262 bits (669), Expect = 3e-74
 Identities = 157/418 (37%), Positives = 240/418 (57%), Gaps = 13/418 (3%)

Query: 5   LQFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLPML 64
           + F DL L   +++ +  + ++  T IQ +AIP  +AGRDLL  ++TG+GKT AF LPML
Sbjct: 15  MTFDDLNLAPAIVQAVREHGYETPTPIQVEAIPAVLAGRDLLGGAQTGTGKTAAFTLPML 74

Query: 65  HKSLKTKA----FSAKDPRGLILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFNDQ 120
           H+   ++     F     R L+L PTRELA QV   +R     LS T+T++ GG   N Q
Sbjct: 75  HRLANSERAKSRFGGVGIRALVLTPTRELAAQVEESVRVYGKHLSLTSTVVFGGVGMNPQ 134

Query: 121 VKALARGPRFIVATPGRLADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRRIHNAAK 180
           + A+ RG   +VATPGRL D      L L  ++ LVLDEADRMLD+GF  ++++I  A  
Sbjct: 135 INAMKRGVDILVATPGRLLDLQQQGFLDLSTVQMLVLDEADRMLDMGFIHDVKKIL-ALV 193

Query: 181 HRRRQTLMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDHKEAL 240
            + +Q+L+FSAT    ++ D+A  LL +P  I +   +   + ITQ  +       K+AL
Sbjct: 194 PKEKQSLLFSATFSD-EIRDLASALLKDPLHIQVTPRNTTVQRITQVIHPVGR-GKKKAL 251

Query: 241 LDRILADAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFERAV 300
           L  I+    + QV++FT T+   + + E L +N + A+AL GN +Q  R   +  F+   
Sbjct: 252 LVHIINQHNWSQVLVFTRTKFGANNVAEYLTKNGIHAMALHGNKSQGARTQALAGFKSGE 311

Query: 301 FKILVTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLVGPKDWE 360
            + LV TD+A+RG+DI  + HV+N+++P  +E+YVHR+GRTGRAGN G+A++LV   +  
Sbjct: 312 IRALVATDIAARGIDIDELPHVVNYEIPNISEDYVHRIGRTGRAGNSGEAVNLVSLDEEG 371

Query: 361 SFKRVEAFLQQEIQFEVLAGLEGKFKGLKPRQAKPKAAPTQRV--NKAKAPSKSKKAA 416
               +E F +Q+I  ++      +F      +A+P A   Q +     K PS+   AA
Sbjct: 372 FMMEIERFTKQQIPVQIFP----EFMPEPGEKAEPIAMGRQTIWGGAGKPPSREVMAA 425