Pairwise Alignments

Query, 452 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 496 a.a., ATP-dependent RNA helicase Bcep18194_A5658 from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  246 bits (628), Expect = 1e-69
 Identities = 143/379 (37%), Positives = 219/379 (57%), Gaps = 7/379 (1%)

Query: 4   TLQFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLPM 63
           T  F +L L   + + +A   +   T IQ QAIP+ + GRD++ +++TG+GKT AF LP+
Sbjct: 2   TQSFSELSLSPAIERAVAEMGYATMTPIQAQAIPVVLQGRDVMGAAQTGTGKTAAFTLPL 61

Query: 64  LHKSLKTKAFS---AKDP-RGLILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFND 119
           L + LK +  S   A+ P R L+L+PTRELA QV  +++      +  +T++ GG +   
Sbjct: 62  LQRMLKHENASTSPARHPVRALVLLPTRELADQVAEQVKLYAKYTNLRSTVVFGGMDMKP 121

Query: 120 QVKALARGPRFIVATPGRLADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRRIHNAA 179
           Q   L +G   +VATPGRL DH++ ++  L  +E +VLDEADRMLD+GF  +L+RI +  
Sbjct: 122 QTAELKKGVEVLVATPGRLLDHIEAKNCVLNQVEYVVLDEADRMLDIGFLPDLQRILSYL 181

Query: 180 KHRRRQTLMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDHKEA 239
             ++R TL+FSAT    ++  +A   L +P  I +   +     + QHFY  +  D K  
Sbjct: 182 P-KQRTTLLFSATFS-PEIKRLANSYLQDPVTIEVARSNATASTVEQHFYRVED-DDKRG 238

Query: 240 LLDRILADAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFERA 299
           +L +IL +   +Q  +F  ++    RL   L +  L   AL G+ +Q +R   +  F+  
Sbjct: 239 ILKQILRERGLKQAFVFVNSKLGCARLARSLEREGLNTTALHGDKSQDERLKALEAFKTG 298

Query: 300 VFKILVTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLVGPKDW 359
              +LV TDVA+RGLDI  V  V NFD+P + E+YVHR+GRTGRAG  G A+S V  +D 
Sbjct: 299 AVDLLVCTDVAARGLDIKDVPAVFNFDIPFNAEDYVHRIGRTGRAGASGLAVSFVSGRDT 358

Query: 360 ESFKRVEAFLQQEIQFEVL 378
                +E  L ++++ E L
Sbjct: 359 RLMGDLEKLLGKKLELEAL 377