Pairwise Alignments

Query, 452 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 459 a.a., ATP-dependent RNA helicase RhlE from Pantoea agglomerans CFBP13505 P0401

 Score =  259 bits (661), Expect = 2e-73
 Identities = 147/380 (38%), Positives = 223/380 (58%), Gaps = 5/380 (1%)

Query: 5   LQFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLPML 64
           + F  LGL   +L+ +A   + + T IQ+QAIP+ +AGRDLLAS++TG+GKT  F LPML
Sbjct: 1   MSFDSLGLSADILRAVAEQGYSEPTPIQRQAIPVVLAGRDLLASAQTGTGKTAGFTLPML 60

Query: 65  HK--SLKTKAFSAKDPRGLILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFNDQVK 122
            K  +  T     +  R LIL PTRELA QV   +      LS  + ++ GG + N Q+ 
Sbjct: 61  QKLSATATPIRGRRPVRALILTPTRELAAQVGENVSDYSKYLSLRSMVVFGGVSINPQMV 120

Query: 123 ALARGPRFIVATPGRLADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRRIHNAAKHR 182
            L  G   +VATPGRL D     ++ L  +E LVLDEADRMLD+GF  ++RR+  A    
Sbjct: 121 KLRGGVDILVATPGRLLDLAQQNAVDLSQVEILVLDEADRMLDMGFIHDIRRVL-ARLPA 179

Query: 183 RRQTLMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDHKEALLD 242
           +RQ L+FSAT    ++  +A +LL  P+ I +   +   + + Q     D    K  LL 
Sbjct: 180 KRQNLLFSATFSD-EIKGLAEKLLTNPEMIEVARRNTASEQVAQQVAFVDK-KRKRELLS 237

Query: 243 RILADAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFERAVFK 302
           +++ +  ++QV++FT T+   + L E+L ++ + A A+ GN +Q  R   +  F+    +
Sbjct: 238 QLIGEGNWQQVLVFTRTKHGANHLAEQLGKDGISAAAIHGNKSQGARTRALADFKSGGIR 297

Query: 303 ILVTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLVGPKDWESF 362
           +LV TD+A+RGLDI  + HV+N+++P   E+YVHR+GRTGRA   G A+SLV   + +  
Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVAEDYVHRIGRTGRAAATGVALSLVCVDEHKLL 357

Query: 363 KRVEAFLQQEIQFEVLAGLE 382
           + +E  L++EI    + G E
Sbjct: 358 RDIERLLKREIPRLAVEGYE 377