Pairwise Alignments

Query, 452 a.a., ATP-dependent helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 454 a.a., ATP-dependent RNA helicase RhlE from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  265 bits (676), Expect = 3e-75
 Identities = 146/380 (38%), Positives = 228/380 (60%), Gaps = 5/380 (1%)

Query: 5   LQFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLPML 64
           + F  LGL+  +L+ +A   +++ T IQQQAIP  + GRDL+AS++TG+GKT  F LP+L
Sbjct: 1   MSFDSLGLNPDILRAIAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60

Query: 65  HKSL--KTKAFSAKDPRGLILVPTRELAKQVYGELRSMLGGLSYTATLITGGENFNDQVK 122
              +  +  A   +  R LIL PTRELA Q+   +R     L+  + ++ GG + N Q+ 
Sbjct: 61  QHLITHQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120

Query: 123 ALARGPRFIVATPGRLADHLDHRSLFLEGLETLVLDEADRMLDLGFAKELRRIHNAAKHR 182
            L  G   +VATPGRL D     ++ L+ +E LVLDEADRMLD+GF  ++RR+  A    
Sbjct: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQIEILVLDEADRMLDMGFIHDIRRVL-AKLPA 179

Query: 183 RRQTLMFSATLDHADVNDMAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDHKEALLD 242
           +RQ L+FSAT    D+  +A +LL  P  I +   +   + +TQH +  D    K  LL 
Sbjct: 180 KRQNLLFSATFSD-DIKALAEKLLRNPLEIEVARRNTASEQVTQHVHFVDK-KRKRELLS 237

Query: 243 RILADAEYRQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFERAVFK 302
           +++    ++QV++FT T+   + L E+LN++ +++ A+ GN +Q  R   +  F+    +
Sbjct: 238 QMIGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297

Query: 303 ILVTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDAMSLVGPKDWESF 362
           +LV TD+A+RGLDI  + HV+N+++P   E+YVHR+GRTGRA   G+A+SLV   + +  
Sbjct: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357

Query: 363 KRVEAFLQQEIQFEVLAGLE 382
           + +E  L++EI      G E
Sbjct: 358 RDIEKLLKKEIPRITTPGYE 377